Gene Msed_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0629 
Symbol 
ID5103789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp575428 
End bp575844 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content43% 
IMG OID640506533 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_001190728 
Protein GI146303412 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGA GGGTTGGAAT AGAGGGTTTT TCCATAGACT CGGCCCATTA CACGCTTTCC 
TCTCCCAAGG ATAATCAGCT ACACGGGCAT ACCTATAGGG TTACGGTGGA AGTAGAGGGA
GAAGTTCACG AGGAGAATGG TTTTGTTGTG GATTTCAACA AGTTGAGGGA GCTGATTAAG
GAGGCCATCT CGTCCTGGGA TCACAAGTTC ATTGTTCCTA GAAGAGATAT GGACAAGATT
AGTATAACTT CACCGTTCAA GTTAGAAGTG AAAATAATTG AAGCTCCCTA TCCCACTGTG
GAGTACATAG GCATGGAGAT TGCTAAATAC GTCTTCACAA GATTAGGGAG CAATTTCAAG
GTATTCGTCA AAATATATGA GGGATCCGAT TCCTATGCCT TGATAGAATA CCCTTGA
 
Protein sequence
MKVRVGIEGF SIDSAHYTLS SPKDNQLHGH TYRVTVEVEG EVHEENGFVV DFNKLRELIK 
EAISSWDHKF IVPRRDMDKI SITSPFKLEV KIIEAPYPTV EYIGMEIAKY VFTRLGSNFK
VFVKIYEGSD SYALIEYP