Gene Msed_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0609 
Symbol 
ID5105581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp561468 
End bp562304 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content48% 
IMG OID640506513 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_001190708 
Protein GI146303392 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.515011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.94537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCAC CAAAGTTCGG TTATGTAATA CCCGATTCAG TGGACGAGGC AAACGAGTTT 
CTAGAGAAAC ATGAAGATGC CAAGGCTCTT GCGGGAGGTC ATAGTCTAAT TCCCATGTTG
AAACTAAGGA TACTTAGACC GTCATATCTC GTGGAGCTAA AGGGTTTAAA TGACCTTCAC
TTCATCAAGA AAGAAGAGGG TAAAATAAGA ATAGGTGCGC TCACCACGCA TTATGAGATT
GTAAAGGCAA ATTTACCCCT GTTAAGTGAG GCCGGTGCCA CCGTAGCCGA TCCCCAGGTC
AGGAACATGG GCACAATTGG GGGAGTAATA TCTCACCTAG ATCCTGCAGC TGATTATCCT
GCCTCCCTTA TTGCAATGGA CGCCGTAGTG AGAATAAAAG GTACCAGGGG AGAAAGGGAG
GAACCTTTCA AGGACTTTGC GAAGGACATG TTTTCGCCAG ACCTGAATCC AGGCGAGCTC
GTGAAAGAGG TCATAATACC TGGCTTCAAG GGTTATTCCT TCTCCTACAA GAAACTGGAG
AGGAGGGCCG GAGATTACGC CATTGTGGGA GTGGCTGTCC TACTGAAGAA GGAAGCTGGA
GTTGTGAAGG ACGTAAGGAT TGGTCTCACG GCGGTGAACA ACAAGGCTGT TAGGGCGTCC
GAAGCGGAGA AGGTACTTCT GGATAGATCG CCAGATGAGA AGCTCATAGA GGAGGCTGCG
GAGAAGGCTA TGAGCTACGC TAACCCCACC TCAGATATAA GAGGAAGTGC TGAGTATAAG
AAAAAGATGA CAAGGGTTAT GACCAAGAGA GCTTTACAGG ATGCGTTGAC GAGGTGA
 
Protein sequence
MYPPKFGYVI PDSVDEANEF LEKHEDAKAL AGGHSLIPML KLRILRPSYL VELKGLNDLH 
FIKKEEGKIR IGALTTHYEI VKANLPLLSE AGATVADPQV RNMGTIGGVI SHLDPAADYP
ASLIAMDAVV RIKGTRGERE EPFKDFAKDM FSPDLNPGEL VKEVIIPGFK GYSFSYKKLE
RRAGDYAIVG VAVLLKKEAG VVKDVRIGLT AVNNKAVRAS EAEKVLLDRS PDEKLIEEAA
EKAMSYANPT SDIRGSAEYK KKMTRVMTKR ALQDALTR