Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0406 |
Symbol | |
ID | 5105523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 357158 |
End bp | 358852 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640506312 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001190507 |
Protein GI | 146303191 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACCG TTCAAGACTT TTTCCGGAAG TTCATAGAAT TTCAGAACTC TCCCAATGAG AAGTCCCTTC AGGAGATAGT TAAACTCGTT GGTCAACTAG ACCTAAGGAG GTTTAACTGG GTAAGAGACG TCTTTGAGGA CATTCACGTT AAGGAGAGGG GGAGTAAGAC GGCCCTGATC TGGAGGGACA TAAACACAGG CGAGGAGGCA AAACTGAGCT ATCATGAGCT GTCCTTGATG TCCAACAGAG TGCTGAGCAC GTTGAGGAAA CACGGCCTGA AGAAGGGAGA TGTGGTCTAT CTAATGACCA AGGTTCACCC CATGCACTGG GCAGTGTTCT TGGCCGTAAT TAAGGGAGGT TTCGTGATGG TTCCAAGTGC AACCAACCTA ACTGTAGCAG AGATGAAGTA CAGGTTCTCG GACCTGAAGC CCAGCGCCAT CATCTCTGAC TCATTGAGGG CCTCAGTGAT GGAGGAGGCA CTAGGTTCCC TCAAGGTCGA GAAATTCCTC ATCGATGGGA AGAGGGAGAC CTGGAATTCC CTGGAGGATG AATCCAGTAA CGCGGAACCG GAGGATACCA GGGGTGAAGA CGTGATAATA AACTACTTCA CCTCAGGGAC CACTGGGATG CCCAAGAGGG TTATCCACAC AGCAGTGTCC TACCCCGTGG GATCGATCAC CACAGCCTCC ATAGTCGGCG TCAGGGAGAG CGATCTCCAC TTAAACCTAA GTGCCACAGG ATGGGCCAAG TTCGCGTGGA GCTCATTCTT CTCTCCCCTT CTAGTAGGGG CAACCGTGGT GGGAATAAAT TATGAGGGAA AGCTGGACAC TAGAAGGTAT CTAGGCGAGG TCGAGAACCT GGGAGTGACC AGCTTTTGTG CCCCTCCCAC CGCCTGGAGG CAATTCATTA CCCTCGACCT TGATCAATTC AGGTTTGAGA GATTAAGGTC CGTAGTCAGT GCAGGGGAAC CCCTCAACCC CGAGGTCATA AAGATCTGGA AGGACAAGTT CAACCTTACC ATAAGGGACT TTTACGGCCA GACTGAGACC ACCGCAATGG TGGGGAACTT CCCCTTCCTC AAGGTGAAAC CTGGGTCCAT GGGCAAGCCA CATCCCCTCT ACGACATAAG GCTTCTTGAC GATGAAGGCA AGGAGATTAC GAAACCCTAT GAGGTGGGTC ATATAACCGT GAAGTTGAAC CCTAGGCCCA TTGGTCTTTT CCTGGGTTAT AGTGACGAGA AAAAGAACAT GGAGTCCTTT AGGGAAGGAT ATTACTACAC GGGTGACAAG GCGTATTTCG ACGAGGAGGG ATACTTTTAC TTCGTGGGAA GGGGAGATGA CGTAATAAAG ACCTCAGACT ACAGGGTGGG ACCATTTGAG GTGGAGAGTG CTCTCTTGGA ACATCCCGCA GTTGCCGAGG CCGCAGTCGT TGGAGTCCCT GATACTGTGA GGTGGCAATT GGTGAAGGCC TACATAGTCC TGAAGAAGGG GTACATGCCT AGCAAGGAGC TGGCCGAGGA AATAAGGGAG AAGATGAAGA CCCTTCTCTC GCCTTACAAG GTACCTAGGA TTATCGAGTT TGTGGATGAA CTTCCGAAGA CCATTAGCGG TAAGATCAGG AGGGTTGAAC TCAGGAAGAG GGAGGAGGAA AAGAGGAAGA AGGGAGAGGT GGGACAGAAC GAGTACGTCT TCTGA
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Protein sequence | MVTVQDFFRK FIEFQNSPNE KSLQEIVKLV GQLDLRRFNW VRDVFEDIHV KERGSKTALI WRDINTGEEA KLSYHELSLM SNRVLSTLRK HGLKKGDVVY LMTKVHPMHW AVFLAVIKGG FVMVPSATNL TVAEMKYRFS DLKPSAIISD SLRASVMEEA LGSLKVEKFL IDGKRETWNS LEDESSNAEP EDTRGEDVII NYFTSGTTGM PKRVIHTAVS YPVGSITTAS IVGVRESDLH LNLSATGWAK FAWSSFFSPL LVGATVVGIN YEGKLDTRRY LGEVENLGVT SFCAPPTAWR QFITLDLDQF RFERLRSVVS AGEPLNPEVI KIWKDKFNLT IRDFYGQTET TAMVGNFPFL KVKPGSMGKP HPLYDIRLLD DEGKEITKPY EVGHITVKLN PRPIGLFLGY SDEKKNMESF REGYYYTGDK AYFDEEGYFY FVGRGDDVIK TSDYRVGPFE VESALLEHPA VAEAAVVGVP DTVRWQLVKA YIVLKKGYMP SKELAEEIRE KMKTLLSPYK VPRIIEFVDE LPKTISGKIR RVELRKREEE KRKKGEVGQN EYVF
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