| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0400 |
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| Symbol | |
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| ID | 5105517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 350221 |
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| End bp | 351429 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506306 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001190501 |
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| Protein GI | 146303185 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCCTT TTGAAAACTT GCAGGATTTT GAAATAAAGA TATCCGAAGA TCATGAGCTG
TTCAGGAGAA CAGTGAGGGA ATTTGCAGAG AAGGAGCTTC TTCCCAACGT TCAAAGAATA
GAGAGGGAGA ACTCTATCCC AGATGAAATC TACCAGAAGG CCAGGGAGAT GGGCCTAATG
GGAGTTGGAA TTCCTGAGGC CTACGGTGGC CAGGGAGGAG ACATGATGAT GACCACCATA
GCCAACGAGG AACTCTCAAG GGTGTCTCCA GCATTCATGG TAAGGATAGG AGCTAATCAT
CTTTTTACTA CCCCTGTCCT AATCTTTGGA ACCGAGGAAC AGAAAAAGAA GTACATCCCA
CCAGTAGCTA GGGGTGAAGT TTTCGCCGCC CACGCCAATA CCGAGCCCGG GGCAGGTAGT
GACGTCGCCG GAATAAAGAC AACTGCAAGG AAGGAAGGAA ATAAGTGGAT ACTAAACGGG
AGGAAGTACT TCATCACAGG GTCTGATAAG GCGTCCTTCC TTGTGGTCTC AGCCAGGACA
AGCCCACCTC CCAGCAAGAA GGAGAGGTGG AAAGGGTTGA CTTTCTTCAT TGTGGAGAGG
GACTGGCCCG GCGTTAAGAT AGGATCTAAG ATAAACGTTA TGGGGCTTAG GGGGGAGCAA
CCCAACGAAG TAATACTGGA CAACGTGGAA GTACCAGAGG AGAACGTCCT GGGAAAGGTG
GATGAGGGCT TTAAGGTTGC GGTCACGACG TATGATAGGG GCAGAGTTGG CGTAGCGGCC
CAAGCCGTGG GAATTGCCCA GGGAGCATTC GAGAGGGCCT TCAATTACTC ACTGCAGAGG
CAGGCCTTCG AGAGGCCCCT GATCTCCTTT GAGGGAATAG CCTTTAAGCT GTCTGACATG
TTGGCTCACC TTGAGTCAGC GAGGTTACTC ACCTACTGGG CTGCAACCCT AGCTGAGAAA
AACCACAACC TAGCAGTAAC TGCGGCCTCG CTTGCAAAAA TGATCGCTAC TGAGGTAGCG
GAACAGGTTT CTTCCCTGGC CATAAAGATA CACGGTGGAG CAGGAGTAGA AGTTCAGACT
GGAGTAGAAC GTTACCTAAG GGACGCAATG ATCACCACCA TATACGAGGG AGCCAATGAC
ATACAGAGGT TAATGGTAGC CAGGGATCTA GTGAGAAAAC TTGTGGGGAT AGACATACAA
CTTTCCTGA
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| Protein sequence | MFPFENLQDF EIKISEDHEL FRRTVREFAE KELLPNVQRI ERENSIPDEI YQKAREMGLM
GVGIPEAYGG QGGDMMMTTI ANEELSRVSP AFMVRIGANH LFTTPVLIFG TEEQKKKYIP
PVARGEVFAA HANTEPGAGS DVAGIKTTAR KEGNKWILNG RKYFITGSDK ASFLVVSART
SPPPSKKERW KGLTFFIVER DWPGVKIGSK INVMGLRGEQ PNEVILDNVE VPEENVLGKV
DEGFKVAVTT YDRGRVGVAA QAVGIAQGAF ERAFNYSLQR QAFERPLISF EGIAFKLSDM
LAHLESARLL TYWAATLAEK NHNLAVTAAS LAKMIATEVA EQVSSLAIKI HGGAGVEVQT
GVERYLRDAM ITTIYEGAND IQRLMVARDL VRKLVGIDIQ LS
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