| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0399 |
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| Symbol | |
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| ID | 5105516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 348255 |
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| End bp | 350210 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506305 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001190500 |
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| Protein GI | 146303184 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.165955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGGTAA CCGTAATCGG ATCAGGAGTA ATGGGGCACG GCATTGCTGA ACTTGCTGCC
ATTGCTGGTA ATGAGGTTTG GATGAACGAC ATCTCCACGG AAATACTACA ACAGGCAATG
GAGAGGATAA AGTGGAGCCT CTCAAAACTA AGGGAATCTG GATCCCTCAA GGAGGGAGTT
GAGCAGGTAC TGGCGAGGAT TCACCCTGAG ACGGATCAGG CACAGGCCCT CAAAGGATCT
GATTTTGTAA TAGAGGCGGT AAAGGAGGAC CTTGAATTAA AGAGGACCAT TTTCCGAAAC
GCTGAGGCTC ACGCATCTCC GTCTGCGGTG TTAGCTACTA ACACCAGTTC CTTGCCAATT
TCAGAGATAG CCTCTGTGCT TAAGTCACCG CAGAGGGTAG TTGGAATGCA TTTCTTCAAT
CCTCCAGTCC TGATGCCCCT TGTGGAGATT GTGAGGGGAA AGGACACGTC TGACGAAGTG
GTGAAGACCA CGGCGGAGAT GGCGAAATCA ATGAACAAGG AGACCATAGT CGTAAAGGAT
GTCCCTGGAT TCTTTGTGAA CAGGGTACTT CTGAGGATAA TGGAGGCTGG ATGTTATCTG
GTTGAGAAAG GGATCGCCTC GATTCAGGAG GTAGATTCGT CAGCCATAGA GGAACTAGGT
TTCCCAATGG GCGTTTTCCT TCTTGCGGAT TACACGGGAC TAGACATAGG TTATAGCGTT
TGGAAAGCCG TTACGGCGAG AGGCTTCAAG GCTTTCCCGT GTTCTTCCAC GGAGAAGTTG
GTGTCCCAAG GTAAGCTTGG AGTCAAGTCA GGAAGCGGAT ATTACCAGTA TCCATCCCCT
GGAAAGTTCG TCAGGCCAAC ACTTCCCTCA ACCTCGAAGA AGCTGGGAAG ATATCTCATA
TCACCCGCAG TTAACGAAGT GAGCTACCTT CTTAGGGAAG GCATAGTTGG TAAGGATGAC
GCTGAAAAGG GATGCGTTCT AGGTCTAGGG CTACCCAAGG GAATCCTCTC CTATGCAGAC
GAGATTGGGA TCGACGTTGT GGTGAACACC CTTGAGGAGA TGAGGCAGAC GAGTGGCATG
GATCACTATT CCCCAGATCC CCTTCTGCTC TCCATGGTTA AGGAGGGCAA GTTAGGAAGG
AAGAGCGGGC AGGGATTTCA CACCTACGCC CACGAAGAGG CAAAGTACTC CACGATCGTC
GTGAGGGTAG AACCACCACT AGCGTGGATA GTCCTGAACA GGCCCACTAG GTATAACGCA
ATCAACGGGG ACATGATAAG GGAGATAAAC CAGGCCCTAG ACTCCCTAGA GGAGAGAGAG
GACGTTAGGG TTATTGCGAT TACTGGGCAA GGGAGAGTGT TTAGTGCTGG GGCTGATGTA
ACTGAGTTCG GTTCCTTAAC CCCAGTCAAG GCCATGATTG CATCTAGGAA GTTCCACGAA
GTTTTCATGA AGATTCAGTT TCTAACCAAG CCAGTAATAG CAGTGATCAA TGGTCTCGCC
CTTGGAGGAG GGATGGAGCT AGCCCTTTCG GCAGATTTCA GGGTGGCATC TAAGACTGCG
GAGATGGGAC AGCCGGAGAT AAACCTAGGG CTGATACCCG GTGGAGGAGG AACTCAGCGT
CTGTCCAGGT TGAGTGGAAG GAAAGGCCTA GAGCTCGTGT TAACGGGTAG AAGAGTGAAG
GCTGAGGAGG CGTATCGGCT GGGGATTGTA GAGTTCCTGG CAGAGCCCGA GGAGTTGGAG
TCTGAGGTAA GAAAGTTGGC CAATGCCATA GCCGAGAAAT CTCCCTTGGC AGTGGCCTCA
GCGAAACTGG CCTATAAGCT GGGGGAGGAG ACTCATATCT GGACAGGAAC CTCCCTGGAG
GCTAGCCTCT TCGGTCTCCT CTTCAGTACG AAGGACTTCG AGGAAGGGGT AAGGGCTTTC
CTGGAGAAGA GGAAACCCAA CTTTAGGGGA GAATAA
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| Protein sequence | MKVTVIGSGV MGHGIAELAA IAGNEVWMND ISTEILQQAM ERIKWSLSKL RESGSLKEGV
EQVLARIHPE TDQAQALKGS DFVIEAVKED LELKRTIFRN AEAHASPSAV LATNTSSLPI
SEIASVLKSP QRVVGMHFFN PPVLMPLVEI VRGKDTSDEV VKTTAEMAKS MNKETIVVKD
VPGFFVNRVL LRIMEAGCYL VEKGIASIQE VDSSAIEELG FPMGVFLLAD YTGLDIGYSV
WKAVTARGFK AFPCSSTEKL VSQGKLGVKS GSGYYQYPSP GKFVRPTLPS TSKKLGRYLI
SPAVNEVSYL LREGIVGKDD AEKGCVLGLG LPKGILSYAD EIGIDVVVNT LEEMRQTSGM
DHYSPDPLLL SMVKEGKLGR KSGQGFHTYA HEEAKYSTIV VRVEPPLAWI VLNRPTRYNA
INGDMIREIN QALDSLEERE DVRVIAITGQ GRVFSAGADV TEFGSLTPVK AMIASRKFHE
VFMKIQFLTK PVIAVINGLA LGGGMELALS ADFRVASKTA EMGQPEINLG LIPGGGGTQR
LSRLSGRKGL ELVLTGRRVK AEEAYRLGIV EFLAEPEELE SEVRKLANAI AEKSPLAVAS
AKLAYKLGEE THIWTGTSLE ASLFGLLFST KDFEEGVRAF LEKRKPNFRG E
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