| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0389 |
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| Symbol | |
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| ID | 5103632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 336884 |
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| End bp | 337888 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506295 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001190490 |
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| Protein GI | 146303174 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0180181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGTTT TCGTGATAGG ATCAGGGGTC ATGGGTAGCG GTATAGGTCA GGTCTTTGCC
ATGGCCGGAC ACGAGGTGAC TCTTTATGAC GTTAAGGAGG AGGCACTCAA GAAGGCAATG
GAGGGTATAA GATGGTCCCT TCAGAAGCTC CAGGAGAAGG GAAGCGTGAA GGACGTGGAG
TCGGTCCTGT CGAGAATATT TACCTCAAGG GATTTGAGCG AAGCAAGAGA TCACCTAGTG
ATAGAGGCGG TGTTCGAGGA CATAAAGGTG AAGAGCGATG TTTTAGGCAG GGTCTCTCCC
CTTACCGACG AGATCATTGC CAGCAACACT AGCTCCCTCC CCATCACTGA GCTATCTAGG
GCTGTGAGGA ACCCAGAGCG TTTCCTTGGG ATGCACTTCT TCAATCCCCC AGTTCTTATG
AAACTAGTGG AGGTGATACG GGGAGATAAC ACGTCTGAGG AGAGGTTCAG AGAGGCCCTA
GATATCGTAA AGTCTCTCGG AAAGTATCCG CTCCCCGTTA GGAAGGACGT GTTTGGGTTC
GTGGTAAATA GGATACTGTT CAGGCTCTTC ACCTCCGCTT GCGCTCTCCT AACGCAGTAT
ACCCCACACG AGATCGATTA TGTGGCCATT AAGGAACTTG GTATGCCCAT GGGGTTAATC
ATGCTCCTGG ACTACACGGG TTTAGACGTG AACTACGACA TTTCGAAGGA GGCTGAGAGG
AGAGGTTTCC CGTTCAAATG CGATGTTCTA GAGGGGATGG TGAAGTCGGG TAAACTTGGA
AGGAAATCAG GTCAAGGGTT TTACGACTGG AGCAAGGGTA AACCTGAGGT TAAGGCTACC
AGTGGACCCG ACCCTCGAGA GCTCTTGAGG GGGGCGGTGG AGGAGGCCAA GTGGCTAATA
TCACAGGGTG TGGTGACTAG GGAGGAACTG GAGACTGGTC TGAAGCTGGG ACTTGGAATG
TCTCGAGGAA TCCTTGAACT TGGGGAAATT CTAGGCGTGC ATTGA
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| Protein sequence | MKVFVIGSGV MGSGIGQVFA MAGHEVTLYD VKEEALKKAM EGIRWSLQKL QEKGSVKDVE
SVLSRIFTSR DLSEARDHLV IEAVFEDIKV KSDVLGRVSP LTDEIIASNT SSLPITELSR
AVRNPERFLG MHFFNPPVLM KLVEVIRGDN TSEERFREAL DIVKSLGKYP LPVRKDVFGF
VVNRILFRLF TSACALLTQY TPHEIDYVAI KELGMPMGLI MLLDYTGLDV NYDISKEAER
RGFPFKCDVL EGMVKSGKLG RKSGQGFYDW SKGKPEVKAT SGPDPRELLR GAVEEAKWLI
SQGVVTREEL ETGLKLGLGM SRGILELGEI LGVH
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