| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0357 |
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| Symbol | |
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| ID | 5105515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 309589 |
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| End bp | 311355 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506263 |
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| Product | Cl- channel, voltage-gated family protein |
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| Protein accession | YP_001190458 |
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| Protein GI | 146303142 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0038] Chloride channel protein EriC
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGAA GGCTGTCGTC TTTGCCTTAC TTCGAGAAGT GGCTCATCCT GGGCATCTTG
CTCGGGGTGG TTGCAGGCTT TGCCTCTACA GTTTTCTACC TTTTGCTTCA TGTGTTCGAG
TATATCTTCA TTACTAGATT TGTGGGTATG TCTTATCCTC ACCCCCTGGG AGAGGGAGGA
ACTCTGAACT TCACGTTTCA CCCTGGGAAT TTCATCCTAG TGCCTGTTTC CCTCATGATA
GGCGGACTCA TATCAGGTCT TGTGGTATAT ACCTTCGCCC CCGAAGCAGA GGGCCACGGT
ACTGACGCTG CCATTAAGGC ATATCATTAT CTCCAAGGAA AGGTCAGATG GGTTGTAATT
CCCGTTAAGA TATTCGCTTC AGCGGTAACA ATAGGATCGG GTGGTAGCGC TGGAAGAGAG
GGCCCCACAG CTCAATTTTC CTCAGGGGTA GGATCGGTTA TTGCGGACTT ACTTAAGCTT
TCGCCAGAGG ACAGAAGGAG GGCGTTAGCT GTGGGTATAG GAGCAGGAAT AGGGACTATA
TTTAAGACGC CCATAGGTGG TGCGCTCCTA GCGTCGGAGA TACTTTACAA GAGGGACTTG
GAACCCGAGT TAATTTACCC TGGACTAATT GCCTCCTCGG TGGGATACAC GATCTTCGGC
ATCATTTTTG GTTTTACTCC CGTTTTCGGG TATTATACGG GAACTTTCAA TCCCATGAGG
TTACCCTTGT ACGCCTTGCT CGGGGTAATA TCAGGGCTGT TGGCCATCCT TTACGTTAAG
TCCTTTTACG GAATATCGGG ATTATTCAAG AGACTAAAGC TTCCCAATCA CGTTAAGCCC
ATGATTGGGG GAGGACTTGC TGGGCTCTTG ACCCTTCTTT TTCCCGAGGT TATGGGTACA
GGATATGGGT GGATAAATCT GGCTGAATTC GAGAGATTCT CGTCCTTCTA TTCACCTGTA
TTACCTGTTC TACTTCTGTT GGCACTACTT CCCCTCGTGA AGATTCTAGC TACCTCGCTC
TCTATAGGAT CAGGAGGAAG CGGAGGTGTC TTTGCCCCTG GCCTATTTAT CGGAGCGTTC
TTGGGAGCAG ATGTGGGTCT GATTTTTCAT TATCTATTTC CTTCCCTTGT GCCCAACATC
GCTCCCTTCG TTATAATAGG CATGATGTCG TTTTTCGCTG CTGCCGGAAA GGTTCCACTA
TCAGTGATAG TGATGGTAAC TGAAATGACC TCAAGTCTTC AACTACTTCC AGGGGCCATG
ATAGCCGTGG CCATCTCCTA CTTGGTTTCA GGAAATTACA CGATCTACAG AAGTCAAGTC
CCAACAAGGA GGGATTCTCC AGCCCATAAG AGCGAGTACG AGATCCCCGT CATGCAGAGG
CTGAAGGTGG GACAATGCAA GAGATACGAC ATACGAGTGT CTCCCTCAAC TACGGTAGAG
GTGGCTCTCA AGGTCATGTT AGACAACAAC TTTCTGAGCC TCCCAGTCGT GGACGAATCG
AGCAGGTTCA TAGGTATAGT GTATTACAGG GATATCGAAG GGAAGAATCC TTTGGATCAG
GTAGGTCGCT ACGTGATGAG AGGCTCTCCT CACGTTTCAC CTCAATCTTC TCTGGAACAA
GCTTGGGAGA TAATGGCTCT AAACAGGAGC AGATGGGTAG CTGTAGTGGA CAAGGGAATC
TTCCAGGGCA TGGTTACCAT GGATTCCCTC TTGGCACTCT ATGAGCATGA AGTTAGGGCC
CTAACAGATA CTTCGCGTGA TACATGA
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| Protein sequence | MSGRLSSLPY FEKWLILGIL LGVVAGFAST VFYLLLHVFE YIFITRFVGM SYPHPLGEGG
TLNFTFHPGN FILVPVSLMI GGLISGLVVY TFAPEAEGHG TDAAIKAYHY LQGKVRWVVI
PVKIFASAVT IGSGGSAGRE GPTAQFSSGV GSVIADLLKL SPEDRRRALA VGIGAGIGTI
FKTPIGGALL ASEILYKRDL EPELIYPGLI ASSVGYTIFG IIFGFTPVFG YYTGTFNPMR
LPLYALLGVI SGLLAILYVK SFYGISGLFK RLKLPNHVKP MIGGGLAGLL TLLFPEVMGT
GYGWINLAEF ERFSSFYSPV LPVLLLLALL PLVKILATSL SIGSGGSGGV FAPGLFIGAF
LGADVGLIFH YLFPSLVPNI APFVIIGMMS FFAAAGKVPL SVIVMVTEMT SSLQLLPGAM
IAVAISYLVS GNYTIYRSQV PTRRDSPAHK SEYEIPVMQR LKVGQCKRYD IRVSPSTTVE
VALKVMLDNN FLSLPVVDES SRFIGIVYYR DIEGKNPLDQ VGRYVMRGSP HVSPQSSLEQ
AWEIMALNRS RWVAVVDKGI FQGMVTMDSL LALYEHEVRA LTDTSRDT
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