Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0309 |
Symbol | |
ID | 5104945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 265576 |
End bp | 266454 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640506215 |
Product | pyruvate ferredoxin oxidoreductase subunit beta |
Protein accession | YP_001190410 |
Protein GI | 146303094 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGACTCC GAGGTCTGCG ATCTGAGTCA CTCCTTCCAG GGACGTCAGC CTGCCCTGGA TGTCCTGAGA ACATGGCCAT GAGAATGGTG GGAATGGCCC TGGGTAAGAA CGTTGCCATG GTTGTAGTGG CAGGGTGTTC CTCCGTAATT CAGGGGATAG GGCCCAAGAA CGCTTACGGC TATCCTGTGC TTAATATAGC CTTCGCTGCC GGTCCCGCAG CAGCCTCAGG TATGTGGAGG GCCTTCAAAC AGAGGAACAA GGACGTGACT GTGGTGGTCT GGGCTGGAGA TGGAGGTACA GCGGACATAG GGTTTGCATC ACTTAGCGGA GCTGCTGAGA GGAACGAGGA CTTCATATAC CTCTGTGTGG ACAATGAGGC CTACATGAAC TCCGGAGGTC AGAGGAGCGG TTCCACCCCC CACGGTGCCG TAACCACTAC CACACCTGAA GGGAAGAAGG AGAACAAGAA GGAGTTACTC TTCATAATGC TTGACCATAA CGTTCCCTAT GTGGCCACGG CATCCGTGGG CTATCCCCAT GACCTCATGG ATAAGTTGAA GAGGGCCAAG GAAGTGAACG GATTTAGGTA TATCCAGATC CTTACACCAG ACCCTTATGG TTGGCTATTT GATCCCTCTA AGACCGCTGA GGTTGGCAAG TTGGCTGTGC AGACGTGTTA TTGGCCCCTC ATAGAGGTTA TGAACGGGAA GGTTAGGGTA AGTAATGAGT CGCTCCATTG CCTTAAGAAG GAGACCAGAA GGCCCTTGAA GGACTTCCTT TCTGTTCAGG GCAGGTACAA GAAGCTCCCG GAAAGGGATT ACCTGGAACT AGAGAAGTTC GTGGATGACC TCTGGGAAAG GATAATCTCC ATGAGCTAA
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Protein sequence | MGLRGLRSES LLPGTSACPG CPENMAMRMV GMALGKNVAM VVVAGCSSVI QGIGPKNAYG YPVLNIAFAA GPAAASGMWR AFKQRNKDVT VVVWAGDGGT ADIGFASLSG AAERNEDFIY LCVDNEAYMN SGGQRSGSTP HGAVTTTTPE GKKENKKELL FIMLDHNVPY VATASVGYPH DLMDKLKRAK EVNGFRYIQI LTPDPYGWLF DPSKTAEVGK LAVQTCYWPL IEVMNGKVRV SNESLHCLKK ETRRPLKDFL SVQGRYKKLP ERDYLELEKF VDDLWERIIS MS
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