Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0252 |
Symbol | |
ID | 5103872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 212432 |
End bp | 213385 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640506158 |
Product | daunorubicin resistance ABC transporter ATPase subunit |
Protein accession | YP_001190353 |
Protein GI | 146303037 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.297756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTCGA TTGAGACAGA AAATCTTACA AAAAAATATG GAGATTTTGT AGCTGTTGAT CACGTCTCAT TCAAGGTGGA GAAAGGGGAG ATATTTGGTC TTTTGGGTCC GAACGGGGCA GGGAAAACTA CCACCATCAA GATGCTCACA GGTTTAACTC CACCTACGGA GGGGGAGGCA ATAATCGCGG GGTATAGTAT AAGGAAAAAT CCAATAGAGG TAAAGTCGAG GATAGGATGG ATCTCTTCGG AAGTCATCCT GGATGACGAC TTAACTGCTT GGGAGAACCT AGAAATTCAG GCCAGGCTCA CAGGAGTCAA GAACTGGAAG GAAAGGGCAA CCTCTCTTCT TAAGTACTTT GGAATCCTCG AGTTCGCCAA TCGTAGGACT GGAAAGTTCT CCACTGGAAT GAGGAAGAAA CTAGAGGTTT CCATGGCCCT ACTCAATTCC CCAGAAGTGA TCTTCATGGA TGAACCCACA ATTGGGCTAG ATGTGAACAC CAGGGCTACC ATGTGGAATC TGATAAGGGA AATAAACAGG GATTACCAGG TGACAATACT CTTGACTACC CATTACATGG AGGAGGCAGA TTCCTTGTGT TCAAGGATAG GGATCATTAA CAAGGGGAAA ATCATCGCAC TGGGAACTCC AGAGGAATTG AAGGCCAGAT ATGGAGGGGA TATAATAGAA ATCGAGCTTA AGAACGGGGC AAACGTCAAC GTGGGGCTCG AGAATGCGGT AGTTAGTAAT GGCAAGGTCA GGATAAAGGT GAACAATGCG GAGACCATGC TAATGGACGT CATAAGGGCG ATAGGAAGCG ATAACATCAA GGGCATTAAG ATAAACAAGT CTAGCCTCGA CACGGTTTTC ATAAATCTCA CGGGAGGAAC AATTGAGGAG CAGGACTTTG ACGCCAGGAA GTTCTACGCC ATGATAAGGA GGGCGAGAAG ATGA
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Protein sequence | MYSIETENLT KKYGDFVAVD HVSFKVEKGE IFGLLGPNGA GKTTTIKMLT GLTPPTEGEA IIAGYSIRKN PIEVKSRIGW ISSEVILDDD LTAWENLEIQ ARLTGVKNWK ERATSLLKYF GILEFANRRT GKFSTGMRKK LEVSMALLNS PEVIFMDEPT IGLDVNTRAT MWNLIREINR DYQVTILLTT HYMEEADSLC SRIGIINKGK IIALGTPEEL KARYGGDIIE IELKNGANVN VGLENAVVSN GKVRIKVNNA ETMLMDVIRA IGSDNIKGIK INKSSLDTVF INLTGGTIEE QDFDARKFYA MIRRARR
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