| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0225 |
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| Symbol | |
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| ID | 5104091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 186748 |
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| End bp | 187167 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506130 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190326 |
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| Protein GI | 146303010 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4755] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.73932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00846992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGAAGGCT CATTCATTAG TAATCTGGAT GAATGGATTA AGATGCAGAA GAATCTGCTT
GCAACAATCA AGGACATGGA GAAGAAAGAG GAGACAATGG AGGAGGACAG GTTAGACCTA
ATTCTCGCCT CGAGGGTAGC TTTCCAGCAC ATGATGAGGA CCTTGAAGGC TTTCGATCAA
TGGTTACAGG ACCCCATGAT AATCAAGCAT ATGCCAAGGG AGATGCTTGA GGATGTTAAG
AAGACCAGTT GGGCTATACT TCAGCAACTC CTAGAACTAG ATGTGAGACA TACGAGCCAG
GCCAAGGAAT TGATAACGAA GCTTGGGAAA GAGGGGAAGT TAGATCCCTT AATCTGGAGC
AGACCGCCAG TGGAAGAACA ACCTAGCCAG CCAAAGAGAG GTACCTTCAC AACAATGTAA
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| Protein sequence | MEGSFISNLD EWIKMQKNLL ATIKDMEKKE ETMEEDRLDL ILASRVAFQH MMRTLKAFDQ
WLQDPMIIKH MPREMLEDVK KTSWAILQQL LELDVRHTSQ AKELITKLGK EGKLDPLIWS
RPPVEEQPSQ PKRGTFTTM
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