| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0219 |
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| Symbol | |
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| ID | 5104085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 180465 |
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| End bp | 180728 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640506124 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190320 |
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| Protein GI | 146303004 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000254454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0235176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGACG TTCGAGACCT ATTACTTAAG GTGCTCAGGA AAATAGATCC CACCATCATT
GAGGACACTG TGGATATCAA GTTTATACAG AACTTCAAGG ACAGATATGA CGTGTTCGGC
CAGTTCAAGA ATGCCAAGGG GATTTACGAA TTTGCGGTGA GCTTTGATAA CAAGGGAAAT
ATTAAGAGAG AACACGTTAA CATGATAGTC CCTCATAAGG TTAGAGATGA TATTGAACGT
AAAGTTTACG ATAAAGGTGA TTGA
|
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| Protein sequence | MDDVRDLLLK VLRKIDPTII EDTVDIKFIQ NFKDRYDVFG QFKNAKGIYE FAVSFDNKGN
IKREHVNMIV PHKVRDDIER KVYDKGD
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