Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0194 |
Symbol | |
ID | 5103938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 156749 |
End bp | 158887 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640506099 |
Product | xanthine dehydrogenase, molybdenum binding subunit apoprotein |
Protein accession | YP_001190295 |
Protein GI | 146302979 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0755616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATACG TAGGTAAACC TGTTAGAAGG GTTGAGGATC CGAAGCTTAT AACAGGAAGG GGTTCATTTG TTGACGACAT CCAGATACCG GGGACCTACT ACGTGGCCTT TGTAAGATCT AAATATCCAC ACGCGCGGAT TAGTGTTAAA CCAAGTCAGA ACGTTTTCAC TGGTTCTCAA ATAAATCCAG GGAAGGATTT TCCTATTCCG TCTAACGAAG TCATATATGC AGGTCAACCT ATTGCAGCAG TGATCGCCAG AGACCGATAT GAGGCTTACG ATCTTTTAGA GAGCGTTGAA GTGGAATACG AGCAACTACC CTATGAAACA GATCCCTTCA GGGCCATGGA AGACAAGGTC AAGGTCTACT CTAAGGCTGA AAGTAATATT TACGCGAAAA AGGAGTTCGT TGGAGGAGAA GCGAAGAAAG AGCTGGAACA ATCTCCAATC GTGTTATCCG GAGAACTCCA TAACCAAAGG ATTATAGCTT CGCCCATGGA GACCAGAGGG ACTCTAGCCT GGTTTGACGG TAATAGGCTG AACGTCTGGT CCTCTACTCA GTCGGCGCAC TATTTAAGGA GAAACCTGGT GAGCTTCCTG GGAATACAGA ATATCAGGGT CATTCAACCA GACGTGGGAG GGGCCTTTGG GAGCAAGATA ATAACTCACC CAGAGGAATA TGCGGTGAGC TTCCTTGCCC TTAAACTTGG GATCCCCCTA AAGTGGATAC CCACGAGAAC AGAGGAGATG CTGAGCGCTG GACATGGAAG AGATAAGTGG CTGAGATACA AGGTTGGTGT AAAGAGGGAC GGAACTATCA CGGCAGTTGT TGGAACTGTG GTGGGAAATC TAGGGGCTCC CTATCGTGAT GCCAACGACG ATGATTCTGG GAACGTCATG AGCGCCGCTA GGATGCTCCC TGGACCGTAT AGAATAAAGC ATGGGTTTGT CGCTGCTTAC AGCGTTAACA CTAACCTAAC TCCGACTACC TCATATAGGG GAGCCGGTAG ACCAGAGGCT ACCTATTTCA TTGAAAGTAT AATCGAGGAG ATAGCTGAAG AGCTGAAGCT GGACCCGCTA GAGGTCAGGC TCAGAAACGT GATAAGACCT GAGGAGATGC CCTACACTAA CGTGTTTGGT ATAACCTATG ATTCCGGAAA CTACCCAGAG TTACTAAACT CAGCTAAATC ATACTATGAA CAACTTAAGG CTGAAGCTAA AGACAACCAG TGCGTAGGAC TGGCGATGTA CGTTGAAATA ACAGCGTTCG GCCCCTGGGA GACAGCCAGG GTTTACGCTA AGTACGACGG AAGGATAGTT GTGGTCACTG GCACTGGACC GCACGGCCAA GGTGATGCAA CTGCTTTTGC ACAGCTCGCA GCCGATGCCT TGGAAATCTC CATGGATCTT GTGGAGGTCA GGTGGGGAGA TACTGATGTG ATTGAAGATG GAATTGGGAC TTGGGGAAGT AGAACAGTTA CTATTGGAGG CTCGGCAGTA ATAATGGCTT CTCAAGAACT TAGGAAAAGG CTAACAGAGG CTGGCGCGAA AGCCCTTGAA GCTGACGTAG AGGAGGTAGA GTATAGGGAG GGCAAAGTGG TTCATAAAAA GACTGGAAAA AGTCTAGAGT TAGCTGAGAT CATCAAGTCA GCCTATAAGC TCGGTATTTC CCTTGATGTG ACCTCCGTCT ATCCGGTCAA AAAGCCCACA TCACCTTATG GAGTTCACAT GGCATTAATG GAGATAGATA GGGAGACTGG ACTAATTAGC GTGAAGAAAT ACATTGCCGT CGATGACGTG GGGAACGTTA TTAATCCCCT ATTGGCTGAG GGACAGATCC ACGGAGGTGC GCTTCAAGGA ATAAGCCAGG CCTTATATGA GGAGGCCGTA ATTAATGATG GTACCTTACA GAATCCTACC TTTGGCGACT ATGCGTTACC CACAGCGGTA GAGACCCCAC GCTTCACATG GAAGTATCTC ACCAACGGTC TTTCACCCCA TCCCACTGGA AGCAAGGGAA TAGGCGAGGC CGGGACGGTC GTAGGAACTC CGGTTATATC CAATGCGATC TCCAGTTGTC TGAAGAGGAA GTTCAGTACC ATGCCTATCT TATTGGAGAA GGTATTAGGT GACCAGTAG
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Protein sequence | MRYVGKPVRR VEDPKLITGR GSFVDDIQIP GTYYVAFVRS KYPHARISVK PSQNVFTGSQ INPGKDFPIP SNEVIYAGQP IAAVIARDRY EAYDLLESVE VEYEQLPYET DPFRAMEDKV KVYSKAESNI YAKKEFVGGE AKKELEQSPI VLSGELHNQR IIASPMETRG TLAWFDGNRL NVWSSTQSAH YLRRNLVSFL GIQNIRVIQP DVGGAFGSKI ITHPEEYAVS FLALKLGIPL KWIPTRTEEM LSAGHGRDKW LRYKVGVKRD GTITAVVGTV VGNLGAPYRD ANDDDSGNVM SAARMLPGPY RIKHGFVAAY SVNTNLTPTT SYRGAGRPEA TYFIESIIEE IAEELKLDPL EVRLRNVIRP EEMPYTNVFG ITYDSGNYPE LLNSAKSYYE QLKAEAKDNQ CVGLAMYVEI TAFGPWETAR VYAKYDGRIV VVTGTGPHGQ GDATAFAQLA ADALEISMDL VEVRWGDTDV IEDGIGTWGS RTVTIGGSAV IMASQELRKR LTEAGAKALE ADVEEVEYRE GKVVHKKTGK SLELAEIIKS AYKLGISLDV TSVYPVKKPT SPYGVHMALM EIDRETGLIS VKKYIAVDDV GNVINPLLAE GQIHGGALQG ISQALYEEAV INDGTLQNPT FGDYALPTAV ETPRFTWKYL TNGLSPHPTG SKGIGEAGTV VGTPVISNAI SSCLKRKFST MPILLEKVLG DQ
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