| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0193 |
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| Symbol | |
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| ID | 5103937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 156280 |
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| End bp | 156747 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506098 |
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| Product | putative RNA-binding protein |
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| Protein accession | YP_001190294 |
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| Protein GI | 146302978 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2016] Predicted RNA-binding protein (contains PUA domain) |
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| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0504341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGAGAC ATCTCCTTTC CCAAAAGGAG GCCAAGGAGT TCAAGGAGAA AGTTAGAAAT
CTCTATGGTG TAGATCTGAC ATCAGATAAG ATCGAGATAG GAAAGGAGAA AAGACAACTG
TTTTACTTTG TGGATGATGT TCTGAGTTTT TTCGGCGAGA ATCTGACTCC AACACTATGT
TTCCTTTTAA AGCACAGAAC TAACCTTCCC TGGGTAAAGA TAGACGAGGG CGCAGTGAAG
GCTGTCGCCA GAGGAGCAGA CCTTTACGCG CCTGGCGTTG TGGAGCATTC TGGAGACGTG
AAACCGGGCC GTCTTCTTGT GGTAAAGACG AAGCTTGATC AGCCAGTCGC CATCATGAAT
ACCGTGGAAG GGGCAGACGA AGCCCTAAAG AACAAAAGGG GGAAAGTGGC GTCTGCATTG
CACTGGATCG GAGATGATAT GTGGAATTTA TGCAGATCGA AATCTTAG
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| Protein sequence | MQRHLLSQKE AKEFKEKVRN LYGVDLTSDK IEIGKEKRQL FYFVDDVLSF FGENLTPTLC
FLLKHRTNLP WVKIDEGAVK AVARGADLYA PGVVEHSGDV KPGRLLVVKT KLDQPVAIMN
TVEGADEALK NKRGKVASAL HWIGDDMWNL CRSKS
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