Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0121 |
Symbol | |
ID | 5104974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 99260 |
End bp | 99667 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640506020 |
Product | hypothetical protein |
Protein accession | YP_001190222 |
Protein GI | 146302906 |
COG category | [S] Function unknown |
COG ID | [COG1371] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000001565 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000415863 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTTTCC AATTCTTCGA TCATACGGCT GACGTGGGAA TCAAGGCTTG GGGAAAGACC TTGGAAGAGG CATTTGAGAA CTCGGCGTTG GCAGTATTCG AAATAATGAC CGATACGTCA AAGATTGAGC CCAAGGTCTC AGTTGACATT GAGGTGGACG GCTATGATCT AGAGAACCTT TTATACAGGT GGATTGAGTC ACTTCTATTT TACTATGACA CGGAGTTACT GATATTCGGT AGATTTCAGG TGAAAATAGA CGGGCTGAAA TTGAAGGCAA AGGCTTTTGG TGAAAGATTT GATGAGACGA AGCATGAAAG GAGAACAGTG GTCAAGGCTA TGACATATCA CGAAATGTCC ATTAAGACGA ACGGAAATGT AGAGATAACG TTTGTAGTCG ATATTTAA
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Protein sequence | MGFQFFDHTA DVGIKAWGKT LEEAFENSAL AVFEIMTDTS KIEPKVSVDI EVDGYDLENL LYRWIESLLF YYDTELLIFG RFQVKIDGLK LKAKAFGERF DETKHERRTV VKAMTYHEMS IKTNGNVEIT FVVDI
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