Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0112 |
Symbol | rpl30p |
ID | 5103920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 93823 |
End bp | 94284 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640506011 |
Product | 50S ribosomal protein L30P |
Protein accession | YP_001190213 |
Protein GI | 146302897 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01309] 50S ribosomal protein L30P, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000210294 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000357235 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCGTCTA TCCTTATTGT AAGGATAAGG GGAAGTGCCT CAACCCCCTG GGATCTTCAG GAGGTTCTGG AGATGCTTAG GTTAAGTAAA CAGTATAGCG CAATGGTGTA TCCAAAGCAG GATGATATTG TAGGAATGGT GAGGAAGGTT CAGTCTTACG TTACCTGGGG AGAGCTTAAC ATGGACGGAG CAAAGGCGTT AATGGCAAGA ATAGAGACCG TTAAAGGCGC ACTAGATCAA TCCTTTATTG AAAAGGAGCT GGGGCTATCA ACGGAAGACT TCATTAAGAA ATTAGTAGAC GGAGAACTAA AATTAAACTC TATTCCCTCT ATAAAACTTC CCATAAGACT TCATCCACCT AGGAAGGGAT TCAAAGGGAA GATAAACTCC TTTATTGGAT CGGGAGGAGA GCTAGGTTAC AGAGGAGAAA AGATTAATGA ACTTGTAAGG AGGATGGTGT AA
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Protein sequence | MSSILIVRIR GSASTPWDLQ EVLEMLRLSK QYSAMVYPKQ DDIVGMVRKV QSYVTWGELN MDGAKALMAR IETVKGALDQ SFIEKELGLS TEDFIKKLVD GELKLNSIPS IKLPIRLHPP RKGFKGKINS FIGSGGELGY RGEKINELVR RMV
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