Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0111 |
Symbol | rps5p |
ID | 5103919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 93171 |
End bp | 93815 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640506010 |
Product | 30S ribosomal protein S5P |
Protein accession | YP_001190212 |
Protein GI | 146302896 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000057291 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000379651 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTGAGG AAGTACCTGT TTCAAATGTA GAGGAGTGGA AACCCAGGAC CAAAATTGGT CAGTTGGTTA AAGAGGGCAA GATAACTTCA ATTAAGGAGC TCTACGCAAG GAACATGAGT ATAGCAGAAC CTGAAATTAT TGATGTTCTA TTGCCTAACA TGAAGTATGA GGTAATTGAT ATAGGAATGG TACAGAAGCA AACAGATGCT GGTGAACTAT CCAGGTATAA GGTTCTCGTA GTAATGGGGA ATTACGATGG TTATGTGAGC ATAGGCGTGG GTAAGTCTAA ACAGTTGAGG GTGGCCATTC AAAAGGCAAT TAGAGACGCA AAAATGCATG TTATACCTGT TAGAAGAGGA TGTGGAAGCT GGGAGTGTAC TTGTGGTGAA TCACATAGCT TACCTTTCCT TGTCTCAGGT AAGTCAGGTA GCGCAGAGGT TGTGTTGAGG CCTGCACCTA AGGGAACAGG TTTAGTAGCT GGAGGAGTAT TAAAGACCTT GCTGACCTAT GCCGGAATAA AGGATGTCTG GTCATTTAGT AGGGGAGAGA CAAGAACAAC GGACAATTTC ATCATGGCAG GCTATAGAGC TCTCTATAAT ACGTATAAAT TCGTAACCCC AGTTGATTGG GCAAGGAGAA GGTGA
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Protein sequence | MAEEVPVSNV EEWKPRTKIG QLVKEGKITS IKELYARNMS IAEPEIIDVL LPNMKYEVID IGMVQKQTDA GELSRYKVLV VMGNYDGYVS IGVGKSKQLR VAIQKAIRDA KMHVIPVRRG CGSWECTCGE SHSLPFLVSG KSGSAEVVLR PAPKGTGLVA GGVLKTLLTY AGIKDVWSFS RGETRTTDNF IMAGYRALYN TYKFVTPVDW ARRR
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