| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0107 |
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| Symbol | rpl6p |
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| ID | 5103915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 91170 |
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| End bp | 91715 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640506006 |
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| Product | 50S ribosomal protein L6P |
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| Protein accession | YP_001190208 |
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| Protein GI | 146302892 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03653] archaeal ribosomal protein L6P |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000249213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000420842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGCAGATGG TATCCTTCAG AGAGGAAATA CAAATACCTT CTGGGATAAC AGTTAACATT
GATGGTAAGA CGGTGAAGGT AAAGGGGAAG AAGGGTGAAC TATCAAGAGA CTTCTCCTTT
GCCAAATTCC TTACCATTTC CCTTGAGGAT GGCAAAATAA TACTAGAGGG ATCCTTCCTG
GGGAGAAGGG AGAAGGCCAC AGCATATAGT ATTGTAAAGC ATATCAAGAA CATGTTCACC
GGGGTTCAAA ATGGATACAG ATATTATCTG AAGATAATAT TTACTCATTT CCCAATAACT
GTAAAGGTTG TTAACGATGA GGTTCAGATC ACTAACCTAA TTGGAGAGAA GAATGTTAGA
GTGGCCAAGA TAATGCCAGG CGTTAAGGTG ACGGTTAAAG GAGAGGATAT AGTGGTTGAA
GGGATTGATC TAGAAAAGGT GTCGCAGACC GCTGCTAATA TTGAGACAGT AACTAAAATC
AGAGATTTCG ATAGGAGGAT ATTCTCAGAT GGGATTTATA TTTACAAGAA AGAGGTGATC
TCGTAA
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| Protein sequence | MQMVSFREEI QIPSGITVNI DGKTVKVKGK KGELSRDFSF AKFLTISLED GKIILEGSFL
GRREKATAYS IVKHIKNMFT GVQNGYRYYL KIIFTHFPIT VKVVNDEVQI TNLIGEKNVR
VAKIMPGVKV TVKGEDIVVE GIDLEKVSQT AANIETVTKI RDFDRRIFSD GIYIYKKEVI
S
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