Gene Msed_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0102 
Symbol 
ID5103910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp88995 
End bp89330 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content42% 
IMG OID640506001 
ProductKOW domain-containing protein 
Protein accessionYP_001190203 
Protein GI146302887 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01080] ribosomal protein L24p/L26e, archaeal/eukaryotic 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000512448 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000470993 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGTATCGT CTAAACTGAT TGCCCCTCTT TCCGATGAGC TAGCGAAGGA ATATGGAATG 
AAAAGAATCG GTATAAGGAA GGATGATACT GTGAGAGTAA TGAGGGGAGA TAATTACGGC
TTTGAGGGAA AGGTGACTCA GGTGTTCCCT GAGTCTGGTA GAATAGCTAT TGAAGGTCTG
ACTAGGAAGA AGGCAGACGG CACTCCAGTC TACATTAAGA TTCACGCTTC TAAGGTAGAA
ATTACTAAGT TGAATACAAA TGATCCAAGG AGGAAAGACA TTATAAATAG GAAAGCTTCA
AGGCAGAAAG AGGAGCAAGG AGGTAAGGCT CAATGA
 
Protein sequence
MVSSKLIAPL SDELAKEYGM KRIGIRKDDT VRVMRGDNYG FEGKVTQVFP ESGRIAIEGL 
TRKKADGTPV YIKIHASKVE ITKLNTNDPR RKDIINRKAS RQKEEQGGKA Q