Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0102 |
Symbol | |
ID | 5103910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 88995 |
End bp | 89330 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640506001 |
Product | KOW domain-containing protein |
Protein accession | YP_001190203 |
Protein GI | 146302887 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0198] Ribosomal protein L24 |
TIGRFAM ID | [TIGR01080] ribosomal protein L24p/L26e, archaeal/eukaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000512448 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000470993 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGTATCGT CTAAACTGAT TGCCCCTCTT TCCGATGAGC TAGCGAAGGA ATATGGAATG AAAAGAATCG GTATAAGGAA GGATGATACT GTGAGAGTAA TGAGGGGAGA TAATTACGGC TTTGAGGGAA AGGTGACTCA GGTGTTCCCT GAGTCTGGTA GAATAGCTAT TGAAGGTCTG ACTAGGAAGA AGGCAGACGG CACTCCAGTC TACATTAAGA TTCACGCTTC TAAGGTAGAA ATTACTAAGT TGAATACAAA TGATCCAAGG AGGAAAGACA TTATAAATAG GAAAGCTTCA AGGCAGAAAG AGGAGCAAGG AGGTAAGGCT CAATGA
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Protein sequence | MVSSKLIAPL SDELAKEYGM KRIGIRKDDT VRVMRGDNYG FEGKVTQVFP ESGRIAIEGL TRKKADGTPV YIKIHASKVE ITKLNTNDPR RKDIINRKAS RQKEEQGGKA Q
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