Gene Msed_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0096 
Symbolrpl22p 
ID5103904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp86598 
End bp87068 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content42% 
IMG OID640505995 
Product50S ribosomal protein L22P 
Protein accessionYP_001190197 
Protein GI146302881 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000729368 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000429528 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAGCAT GGAATTATCC TATTCTATCC CTTGATGATA GTAGAGTTGG TAAAGCAGTG 
ATTAGAAATG CTCCTGTTTC GATAAAGGAT CTCTATAATG TGTGCAAGGC AATTAGAGGA
ATGAATGTTA AGGAAGCCCA GGCTTTCCTC CAGAGAGTTA TGGAGGAGAA GGAGGCCTTG
CCATACTGGA GATATGACCA CGGTGCTTCT CACAAGTCAA ATATCTCAAG AAAATGGAAA
GTCAAAAGTG GCAGATATCC TAAAAAGGCT ATAAAGTATG TAAACAAGGC CCTAGAGAAC
GCATTGGCTA ATGCGCAAGG AAAGGGATTG GATGAGGATA AACTCAAGGT TGTCCATATA
GCAGCGCATA AGGGCATTAT TATAAAGAGA TTTATGCCTA GGGCGTTTGG TAGGGCCACT
AAGAAATACA ACAGGACTTC TCACATAGAG GTTATAGTTG GTGAGGTGTA G
 
Protein sequence
MAAWNYPILS LDDSRVGKAV IRNAPVSIKD LYNVCKAIRG MNVKEAQAFL QRVMEEKEAL 
PYWRYDHGAS HKSNISRKWK VKSGRYPKKA IKYVNKALEN ALANAQGKGL DEDKLKVVHI
AAHKGIIIKR FMPRAFGRAT KKYNRTSHIE VIVGEV