Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0096 |
Symbol | rpl22p |
ID | 5103904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 86598 |
End bp | 87068 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640505995 |
Product | 50S ribosomal protein L22P |
Protein accession | YP_001190197 |
Protein GI | 146302881 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0091] Ribosomal protein L22 |
TIGRFAM ID | [TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000729368 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000429528 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCAGCAT GGAATTATCC TATTCTATCC CTTGATGATA GTAGAGTTGG TAAAGCAGTG ATTAGAAATG CTCCTGTTTC GATAAAGGAT CTCTATAATG TGTGCAAGGC AATTAGAGGA ATGAATGTTA AGGAAGCCCA GGCTTTCCTC CAGAGAGTTA TGGAGGAGAA GGAGGCCTTG CCATACTGGA GATATGACCA CGGTGCTTCT CACAAGTCAA ATATCTCAAG AAAATGGAAA GTCAAAAGTG GCAGATATCC TAAAAAGGCT ATAAAGTATG TAAACAAGGC CCTAGAGAAC GCATTGGCTA ATGCGCAAGG AAAGGGATTG GATGAGGATA AACTCAAGGT TGTCCATATA GCAGCGCATA AGGGCATTAT TATAAAGAGA TTTATGCCTA GGGCGTTTGG TAGGGCCACT AAGAAATACA ACAGGACTTC TCACATAGAG GTTATAGTTG GTGAGGTGTA G
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Protein sequence | MAAWNYPILS LDDSRVGKAV IRNAPVSIKD LYNVCKAIRG MNVKEAQAFL QRVMEEKEAL PYWRYDHGAS HKSNISRKWK VKSGRYPKKA IKYVNKALEN ALANAQGKGL DEDKLKVVHI AAHKGIIIKR FMPRAFGRAT KKYNRTSHIE VIVGEV
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