Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0091 |
Symbol | rpl3p |
ID | 5103899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 83347 |
End bp | 84372 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640505990 |
Product | 50S ribosomal protein L3P |
Protein accession | YP_001190192 |
Protein GI | 146302876 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000432349 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000658147 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGACATA GAAAGTTATC CTCGCCAAGG AGAGGATCAG CCGGATTAAG ACCCAGAAAA AGATCAGAGG AGCTTTTACC ATCTCCAAGA TCTTATCCTG AAGTGAACTT ACCCAATCCC GTAACTCTTG GGTTTGTGGG ATATAAGGTG GGCATGACCC ACATCTTTAT GATAGACGAA GATAGATCCT CGTCTATGTT TGGGAAGGAG ATTTATGTCC CCGTTACTGT TCTGGAGACT CCACCCATTT ACGTTCTTGC GTTAAGAGCT TATGGGTTAA ACAATAGGGG AGAACATTCA GTAATGGGCG AAGTGTGGGG GGATCTGGGA GACTTTGGCA AGTTCATCAC TAGAAGAATA AGGGGATTAA AGATTGATAA AGAGAAGAAG GAACATCAGT TAAAGGACAT TGAGTCTAAC CTTGAGAGCG TTAGCTACTT TAGGCTTCTC GTTTCAACCC AACCGCATCT TATTCCAGCC CTTGGTAAGA AAACTCCGGA TATTGTAGAG GTTCAGATAG GTGGTGGAAA CACAAAAAAC CAACTCGAGT ATGGTTTAAA GCTTCTCGGC AATACTCTTT CAGTAAGGGA CGTCTTCAAA GAAGGTCAGC TTATGGATAT AATAGGTGTG ACCAAGGGAC ATGGTTTTCA AGGTGTGATC AAGAGGTACG GAGTACAGGA GTTACCTAGA TGGCATAAAC ATAGGAAAGG TAGCAGGAAG GTTGGTACAA AAGGTCCATC TTTGGGAACT CCAAGTTATG TTCCTCAGCC AGGCCAGATG GGATTCCACA GGAGAACCGA GTACAACAAG AGGATCCTGA AGATATCAGA CGATACCAAG TTGATAAACC CCAAGGGTGG TTTCGTGAGA TATGGACTAG TCAAGAATAC CTACCTTCTA GTTCAAGGCT CCACGATAGG ATCCATAAAG AGACCTCTCT TCCTGAGGTA CCCCATCAGA CCTTATTCCG CACAACTTCC GGTTCCGAAG GTTACCTATG TGGATGTGAA CAGTAAGCAG GGGTGA
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Protein sequence | MGHRKLSSPR RGSAGLRPRK RSEELLPSPR SYPEVNLPNP VTLGFVGYKV GMTHIFMIDE DRSSSMFGKE IYVPVTVLET PPIYVLALRA YGLNNRGEHS VMGEVWGDLG DFGKFITRRI RGLKIDKEKK EHQLKDIESN LESVSYFRLL VSTQPHLIPA LGKKTPDIVE VQIGGGNTKN QLEYGLKLLG NTLSVRDVFK EGQLMDIIGV TKGHGFQGVI KRYGVQELPR WHKHRKGSRK VGTKGPSLGT PSYVPQPGQM GFHRRTEYNK RILKISDDTK LINPKGGFVR YGLVKNTYLL VQGSTIGSIK RPLFLRYPIR PYSAQLPVPK VTYVDVNSKQ G
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