Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0090 |
Symbol | |
ID | 5103898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 82464 |
End bp | 83192 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640505989 |
Product | hypothetical protein |
Protein accession | YP_001190191 |
Protein GI | 146302875 |
COG category | [S] Function unknown |
COG ID | [COG2106] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000142872 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000554802 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTCCCT TTCCCAGGGC TCACCCCCTT AATGTAGCTA TCTATCCTGA TATGTTTACC TTGAAAAACA ACCTTACGGT TTTTACCCTG GAGGTTTCTG ACGTAATTAG GGCTTTGGTT GAGTTCAGGG TCACAAGGCT CTACCTAGTG GATCGGGGCG AACGTTCGCA CTTGTCTAGG ATAAGGAAGC TCATGACATA TGCTATGACC CCTCCTTACC TTAAAAGGAA TATAGGGATA GACCCGGACC TCAGCAAGGC AGGTTTACTT CAGCCTATTA ATACTCCCTA TCATGCTGTA TCTAATGTTC CTGTAGAGGG GGAGATAAGA CTGGTCCAGC GGGGGAATAG TGGTCTGAAG GGTTGTGAAG GGAAGAACGG TTTCATGCTA GTGGTTAACT CTGAGAAATG CAAAGCATTG AGGTACACTT CACCCTTCTA TGAAGGACCA TCAATTGAGA CCATCTCTGA ACTAGATTTA GGCAAGATTA ACAACGTCGT AATAGCTAGC AGATCTGGTC TTGATCCTTT GGAGAGTATC GGTACCCTAA GATCTATGTA TCAAAGTCAT GGCATCACGC TTTTAATAGG ACCTCCAAGC GGAGGTATAA AGTCATTGTT CAAGGCCTAT CCATCCTTTA ACTTCATACG TAAACAAGGG GTATCCGACG TTAGGTCTAA GGAGGCCTTA ATTGCAAGTC TCACTGTACT AAATTTTATC TTAATGTGA
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Protein sequence | MFPFPRAHPL NVAIYPDMFT LKNNLTVFTL EVSDVIRALV EFRVTRLYLV DRGERSHLSR IRKLMTYAMT PPYLKRNIGI DPDLSKAGLL QPINTPYHAV SNVPVEGEIR LVQRGNSGLK GCEGKNGFML VVNSEKCKAL RYTSPFYEGP SIETISELDL GKINNVVIAS RSGLDPLESI GTLRSMYQSH GITLLIGPPS GGIKSLFKAY PSFNFIRKQG VSDVRSKEAL IASLTVLNFI LM
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