Gene Mrub_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2808 
Symbol 
ID8880921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2847378 
End bp2848670 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content66% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003508575 
Protein GI291297177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.512241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC TACTGGTTCT AGGAACGGCC CTGGCCCTCA CGCTGGCCTC GGCCCAGTCC 
ATACAGGGGA ACCCCAACCT GCGCGGCGAG ATCACCGTGT GGAGCTGGGA CATCGCGGCC
AAAGCCCTAC AGGCCAACAT CCCCGGCTTC AACAAACTCT TCCCCAACGT TAAGGTCAAC
GTGGTGGATC TCGGCAACCA GGCCACCTAC GACCGCGGCC TGGCCGGCTG TGCTGCCGGC
GGGGGCGACC TGCCCGACGT CTACTCCGTT GAGAACAACG AGGCTGAGGT GTTCTGGGCC
CGCTTCCCCA ACTGCTTCAC CGACCTCAAC ACCCTGCAGC CCGCCGCCTC CACCCTGCGC
AACCAGTTCC CCGCCTTCAA GTGGACCGAG CTCACCGTGG GCAACAAGGT CTTCGCCATG
CCCTGGGACT CTGGCCCGGT GGTCATGTTC TACCGGCGCG ACATCTACAG CCAGGCGGGT
GTCAACCCAG CCACCATCCG CACCTGGGAC GACTTCATCG CCGCAGGCCG CCGCATCGCC
CAGGCCACCA ACAACCGCGT CAAGGTAGGG GTGATTGCCA ACGGCCAGGA CGACGAGTGG
TTCCGTATGC TGGCCAACCA GAACGGCTGC TTCTACTTCA ACAACGAGGC CAACGCCGTC
ACGGTGAACC AGCCCGGCTG TGTAACCGCG CTCGAGACCG TCAAGAAGCT GATTGACGCC
GGTATCGTGA TGCAAGGCGG CTGGAACGAG CAGATTCAGG CCTTCAAGGC CGGCACCGTA
GCCACCAGCA TGTTCGGGGC CTGGTACGAA GGCACCATCC GCTCCAACGC CCCCGAGCAG
AGCGGTAAGT GGGGCGTGTA CCCGATGCCC GCCTCCCGCC CCGGTGGGGT GCGCGCTGCC
AACCTGGGCG GCTCAGCCCT GGCCATTCCT GCCTCCTCGC GCAACAAGGA AGCCGCCTGG
GCTTTCGTCC GCTATGCCCT GGGTACTACC GAAGGCCAGG TGACCATGCT CAAGGAATTC
GGCCTGGTGC CCTCGCTGCT GGCCGCCACC CGCGACCCCT ACGTGGCCCA GCCTCAGCCC
TACTGGGGCA ACCAGCGCAT CTGGCAGGTG ATCCTGGGCA CCCTGGGCAA CGTGCCGGCG
GCTCGCGGCA CCCAGTTCTT CCAGGAAGCC CGCGCCATTA TGGTCAAGAC CCAGGCTGAC
TACGTCGCTG GGCGTTTCCC AAGCGCCAAG GCCGCCCTCG ACGCTGCCGC CCAGCAGATC
TCGCAGGCCA CCGGTCTGCC CATCGCACGC TAA
 
Protein sequence
MKRLLVLGTA LALTLASAQS IQGNPNLRGE ITVWSWDIAA KALQANIPGF NKLFPNVKVN 
VVDLGNQATY DRGLAGCAAG GGDLPDVYSV ENNEAEVFWA RFPNCFTDLN TLQPAASTLR
NQFPAFKWTE LTVGNKVFAM PWDSGPVVMF YRRDIYSQAG VNPATIRTWD DFIAAGRRIA
QATNNRVKVG VIANGQDDEW FRMLANQNGC FYFNNEANAV TVNQPGCVTA LETVKKLIDA
GIVMQGGWNE QIQAFKAGTV ATSMFGAWYE GTIRSNAPEQ SGKWGVYPMP ASRPGGVRAA
NLGGSALAIP ASSRNKEAAW AFVRYALGTT EGQVTMLKEF GLVPSLLAAT RDPYVAQPQP
YWGNQRIWQV ILGTLGNVPA ARGTQFFQEA RAIMVKTQAD YVAGRFPSAK AALDAAAQQI
SQATGLPIAR