Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2710 |
Symbol | |
ID | 8880822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 2743348 |
End bp | 2744988 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | phytoene desaturase |
Protein accession | YP_003508479 |
Protein GI | 291297081 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.487747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGAA CGGCCATTGT GATTGGATCG GGTATTGGGG GCCTGGCCAT GGGCCTTCGC CTGCAAAGCC TGGGCTTCGA TACCACCATT GTAGAAAAAC TGGACGGCCC CGGCGGGCGG GCCTACGTGC GGCAGGTGGA CGGCTTCACC TTCGACATGG GGCCCACCGT TATCACCGTG CCGCACTTCA TCGAGGAGTT GTTTAGCCTC GAGCGCGGGA AACCCCACCT GCACCTGCCC GATTTTCCCC CCGAGGTGCA GGGCGAGGAC AAGCGCATCA AGAGCGGCCT CTCGGGCGGG CCCAACACCA GCAAGTACGT GCAGATCGTC CCCATTCTGC CTTTTTATCG CATCTACTTC GACGACGGCA CCTTCTTCGA CTACGACGGC GACCCCGAGA ACACCCGCCG CCAGGTCAGG GAGCTGGGCG AGCCGGGCGA CCTCGAGGGC TACGAGCGCT TCCACGCCGA TGCCAGGGCC ATTTTTCAGC GGGGGTTCCT CGAGCTCGGC TACACCCACT TCGGCGACCT GGGCACCATG CTGCGGGTGG TGCCCGACCT GCTGCGGCTG GACGCGGTGC GCACCCTGTT CAGCTTCGCC AGCAAGTACT TCAAGTCGCC CAAGCTGCGC CAGGTCTTCA GCTTCGAGAC CCTGCTGATC GGGGGCAACC CCCTCAGCGT GCCGGCCATC TACGCCATGA TTCACTTCGT GGAGAAGACC TGGGGCATCC ATTTCGCCCT GGGAGGTACC GGGGCTCTGG TGCGGGCTTT CGTGCAAAAG TTCGAGGAGC TGGGCGGCAA GATGCGCTAC AACGCCGAGG TCAAGAAGAT TAACGTGGTG CGGGAGGGCC GAAAGAAAAT CGCCAAGGGC ATCACCCTGG CCGACGGCAG CGTGCTGCAC GCCGATATTG TGGTCTCCAA CGCCGACTAC GCCCACACCT ACCTGAAGCT AATCGAGCCC CAGTACCGCT TCTGGAACTC CGACCTCATC GTGAAGAAAC GGCCCCAGAG CATGTCGCTG GTGGTGATCT ATTTTGGCTT CAAAGCCGAC GGCACCGAAG GGCAGAAGCT GCGGCACCAC AACATCATCC TGGGGCCGCG CTACGAGGAG TTGCTGCGCG ACATCTTCGG GCGTAAGGTG CTGGCCAAGG ACTTCAGCCA GTACCTGCAC ATCCCCACCC TCACCGACCC CAGCCTGGCC CCGCCCGGCC ACCACGCCGC CTACACCCTG ATTCCAGTGC CCCACAACGG TAGCGGACTG GACTGGGATC TGCTGGGCGA GCCCTTTGTG AACAAGGTGC TCCGCTTCCT GGACGAGCGC GGCTACTTGC CGGGCCTGAT GGAGCGTCTG GTGCACAAGA GCTTTATCAC CCCCGACTAC TTCGAGCACA CCCTGAACAG CTACCTGGGT AACGCCTTTG GGCCCGAGCC CATCCTGGCG CAGTCAGCCT ACTTCCGGCC CCACAACCGC AGCGAGGACA TCGCCAACCT CTACCTGGTG GGCGCGGGCG TGCAGCCAGG GGCTGGCACC CCCAGCGTGA TGATGTCGGC CAAGATGACC GCCCGGCTGA TTGCCGAGGA CTTTGGAATT GCGAATCAAC CTGTGGAAAA CCATTTACAC GGAGAGCCAG TGAGCGTTTA G
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Protein sequence | MTRTAIVIGS GIGGLAMGLR LQSLGFDTTI VEKLDGPGGR AYVRQVDGFT FDMGPTVITV PHFIEELFSL ERGKPHLHLP DFPPEVQGED KRIKSGLSGG PNTSKYVQIV PILPFYRIYF DDGTFFDYDG DPENTRRQVR ELGEPGDLEG YERFHADARA IFQRGFLELG YTHFGDLGTM LRVVPDLLRL DAVRTLFSFA SKYFKSPKLR QVFSFETLLI GGNPLSVPAI YAMIHFVEKT WGIHFALGGT GALVRAFVQK FEELGGKMRY NAEVKKINVV REGRKKIAKG ITLADGSVLH ADIVVSNADY AHTYLKLIEP QYRFWNSDLI VKKRPQSMSL VVIYFGFKAD GTEGQKLRHH NIILGPRYEE LLRDIFGRKV LAKDFSQYLH IPTLTDPSLA PPGHHAAYTL IPVPHNGSGL DWDLLGEPFV NKVLRFLDER GYLPGLMERL VHKSFITPDY FEHTLNSYLG NAFGPEPILA QSAYFRPHNR SEDIANLYLV GAGVQPGAGT PSVMMSAKMT ARLIAEDFGI ANQPVENHLH GEPVSV
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