| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2575 |
|---|
| Symbol | |
|---|
| ID | 8880686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 2620335 |
|---|
| End bp | 2621027 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_003508345 |
|---|
| Protein GI | 291296947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.556687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAC TGCGCACTCT ACTAGCGCAA AATCTCAGGA CTTTGCGCTA TCAGCGAGGA
CTCTCCCAAG AAGATTTAGC TGACCTAGCA GGTCTTCACC GTACCTATGT TAGCGAAGTT
GAGCGAGGCA AGCGCAATCT GAGCTTGGAT AATTTGGAAC GTCTGGCTAA TGCTCTCCAA
GTTGAAGCAG CGAAGCTTGT CTCGCCTAAC AGCTTTTCTA CAACGGATAT CGCAATTCTT
GAGGCTCTGT TTCCCTATAT TCGACGGTAT CAGATACTTG CCAGCCGTTA TGGAATTGCT
GATATTTTTC AGGACAATGG GGGTAAGTTG CTGGAAATTC TCATACGTAC AGGGCTCAAG
ATTGTGCCTG GGCGTGAAGG TAATGATGCA GTGGATGAGC AAGGTCAGGA GTACGAAATC
AAGTCAGTAA ATGTGGAACT TACCCGCAGT TTTTCGACAC ACCATCACCT GAACCCAAGC
ATTTTAGACA AATATCGGCG AGTTAGATGG ATATTTGCCG TTTACCGTAA CATAGAGCTA
CAAGAGATAT ATTGCCTAGA GCCCCAGCAG CTTGAGCGCT TTTTCAGTGA TTGGGAGCGG
AAGTGGCGGG CTCAAGGAGG CAAAGACATC AACAACCCAA AAATTCCACT GCGGTATGTT
CAGCGGGAGG GTCGCCTCAT TTATTCCCAC TGA
|
|---|
| Protein sequence | MSTLRTLLAQ NLRTLRYQRG LSQEDLADLA GLHRTYVSEV ERGKRNLSLD NLERLANALQ
VEAAKLVSPN SFSTTDIAIL EALFPYIRRY QILASRYGIA DIFQDNGGKL LEILIRTGLK
IVPGREGNDA VDEQGQEYEI KSVNVELTRS FSTHHHLNPS ILDKYRRVRW IFAVYRNIEL
QEIYCLEPQQ LERFFSDWER KWRAQGGKDI NNPKIPLRYV QREGRLIYSH
|
|---|
| |