Gene Mrub_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2554 
Symbol 
ID8880664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2600292 
End bp2601068 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content65% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003508324 
Protein GI291296926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.465274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCCC TGTTCGACCT GAGCGGCACG GTGGCGCTGG TGACCGGCGG CAGCCGGGGC 
ATCGGGCTGG CCAGCGCCCG ACTGTTGGCC GAGCTGGGAG CTCAGGTAGT GCTCTCGAGC
GAAGACCCCA AAGCCTGCGC CGCTGCCGAG GCCGAGTTGC GCGCGCGCGG GATGGCAGCC
TGGGGTCTTC CTTGTGACGT GGGGGAAAAA CCACAGATTG AGCGGCTGGT GGAGCAGACC
CTGGAACGCT TCGGACGGAT TGATGCCCTG GTGGCCGCCG CAGGGGTGGC TCCGCATTTC
GGCCCCGTGC TGAGCGCTTC CGAGGCCGAC TGGGCAACTA CCATGCGGAT TAACTTGCAA
AGCAACCTCT GGTTAGCTGG TCTGGTGATC CCCCAGATGC TGGGCCGCGG GGGTAGCCTG
GTGTTTATCA CCAGCTTATC GGGTTTGCGA GGCAACCAGG AGATAGGTTT GTATGCTATT
TCTAAAGCCG GATTGGCCCA ACTGGTGCGT GATCTGGCTG TGCAGTATGG CCCCCAGGGG
GTGCGGGCCA ACGCGGTGGC ACCGGGGCTA ATTCGCACTG CGTTTGCCCG ACGCTTATTA
GAAAACCCGA CCTTCATGGA GCGCCGGATC GCCCATACCC CTCTACGCCG GGTGGGCGAG
CCCGAGGATG TTGCCGGGGC CGTGGCTTTT CTGGTGAGCC GAGCCGGAGC CTTCGTAACC
GGCCAGACCC TGGTGGTGGA TGGGGGCACC CTGATCTCCG ATGGGAGCGG AGCATGA
 
Protein sequence
MHPLFDLSGT VALVTGGSRG IGLASARLLA ELGAQVVLSS EDPKACAAAE AELRARGMAA 
WGLPCDVGEK PQIERLVEQT LERFGRIDAL VAAAGVAPHF GPVLSASEAD WATTMRINLQ
SNLWLAGLVI PQMLGRGGSL VFITSLSGLR GNQEIGLYAI SKAGLAQLVR DLAVQYGPQG
VRANAVAPGL IRTAFARRLL ENPTFMERRI AHTPLRRVGE PEDVAGAVAF LVSRAGAFVT
GQTLVVDGGT LISDGSGA