| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2415 |
|---|
| Symbol | |
|---|
| ID | 8880525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 2468287 |
|---|
| End bp | 2469288 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_003508186 |
|---|
| Protein GI | 291296788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATT CCAGAAGGTT AGCCCCAACG CTGCTGGTAT ATCTGCTGGC CCTAGGACTG
CTGGTGTTTT CCTTTCTTTT AGCCATCTCC CTGGGGGCCG CCAACATTCC ACTGGATGAG
GTGTGGCGCC TGCTGTTCCA TCCGGAGGGC AGCAACAATG CCCTTATTGT GCACACATTG
CGTCTTCCAA GGGCGATCGT GGCTGCGTTG GTAGGGGCTT GTCTGGGCGT GGCCGGGGCT
ATGATGCAAG GCATTACACG CAACCCGCTC AGCGAGCCTG GGATTATGGG GGTTAATGCT
GGGGCCGTGC TGGCCATACT GGTGGCCCTG GTTTTTTTCC CGGGCCTGCC GCCCTGGAGT
ACCGTGGTGG TGGCCGCCCT GGGTGGGGTT GGTGCTGCAG CGCTGGTATA CAGCATCACC
CTGAGCGTGG GCCTTACGCC GGTTCGCCTG GCCCTGGCCG GTATCGCTGT GGGCTCCATG
CTGGGCGCTG CTGCCAGCTT CTTACTGATT ATCTTTGAAG ACCGCACTCG AGGGGTTTTA
TTCAGCTTGT CGGGCAGTGT GGCCGGCCGT ACCTGGGAAC ACGTCTGGAC GCTGCTACCT
TGGGCTGTGC CCGCTTTGCT GCTAGCCCTG ATCTTGTCTC ATCAGATCAA CTTGCTTAGC
CTTGGAGAGG ATGTGGCCCG TGGATTGGGA ACCAGGGTGG AAGTTGTTCG ACTGGTGAGC
ACAACCCTGG CTGTGTTGCT GGCCGGTGCT GCGGTGAGTG TGGCAGGGCC GATTGGTTTT
TTGGGGCTGA TGGTACCCCA CGCGGCCCGG GGCCTGGTGG GCCCGGATTA TCGTCAAGTG
ATCCCTTTAT CGGCGATTCT AGGTGCGAGT TTAATGCTGC TATCAGATCT GGCGGCGCGC
CTGATTGACA AGCCGCTGGA GACGCCTGTG GGAATTCTGA TTGCCGGAAT TGGAGCGCCG
TTCCTGGTGT ATGTGGCCCG GCGCATGGCC GTGCGGGATT AA
|
|---|
| Protein sequence | MIYSRRLAPT LLVYLLALGL LVFSFLLAIS LGAANIPLDE VWRLLFHPEG SNNALIVHTL
RLPRAIVAAL VGACLGVAGA MMQGITRNPL SEPGIMGVNA GAVLAILVAL VFFPGLPPWS
TVVVAALGGV GAAALVYSIT LSVGLTPVRL ALAGIAVGSM LGAAASFLLI IFEDRTRGVL
FSLSGSVAGR TWEHVWTLLP WAVPALLLAL ILSHQINLLS LGEDVARGLG TRVEVVRLVS
TTLAVLLAGA AVSVAGPIGF LGLMVPHAAR GLVGPDYRQV IPLSAILGAS LMLLSDLAAR
LIDKPLETPV GILIAGIGAP FLVYVARRMA VRD
|
|---|
| |