Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2168 |
Symbol | |
ID | 8880277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 2216076 |
End bp | 2218571 |
Gene Length | 2496 bp |
Protein Length | 831 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_003507942 |
Protein GI | 291296544 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.273298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTACGTGC AGATAAGTAC CTGGTTAAGG CCGCGCAGGC TCGAGCTGCT GGTGGGCTTG GGATTCATGC TGGTGTATGT GCTGGCGTTT CCCCTCCTGT ACCGAAGCCT CGGCCACGGG GCGCTGCACC TGGCTTTGCC AGGGGTGGCC CTGCTGAGCT GGGGGCTGGG CCTGTGGGGT GCGCTGGGGG TGGGCCTGGC CTTGCCCCTC TTGCACATCG CGTTGCTCGA CCTGGTGGGG GTGCCGTGGA ATGCAAATCA GGACGTGGTG CTGGTGGTAG GGGCGGTGGG CTTGCTGACC TGTTTGGTGG TGGGGCTGTT TCGATTCCAG TACGACCGCC GCTGGGCCGC CGAGGTGGCC ATGCAGGAGA GCCAGGCCCA GGCCGAGGCG CGTAACCTCG AGCTGGCCCT TTACTCCAAG GTGCGCGATG GGCTGGCCCG CGACCTCGAG CCGCTGGCCC TGATGCGCGG GGTGGTGGAT GCCCTGCAGG AACACCCGCG CTTCGACAGC GTCGCCGCCT ACCGGCCCGA AGAGGCCTGC TTGCGCCTGC TCTGGGCCGG GGGCAAGCAA ACCCTACCCG AGCAGTTTGA GCCCACCCAC GAGATCGTGC ACCGGGCGGC CCACCTGGCC GAAACGGTGG TGATGTACAG CACCGAGGAG CGCAGCAAAG CCGGCCTGCT GGGCGAGCGC AGCCTGGTGG CGGTTCCGTT GCCGGTCAAG GGCAAGGTGG TGGGGGTGCT GGTGGTGGGC AGTGCCCATA CCGACCTCGA GCCGCGCGAC GTGCGTTTTC TGGAGGGGGT GGCGGGGCAG CTCAGCCTGG CTATTGACCG GGCCCAGGTC TACGAGGCTC TGCGCGAGCA GGAGGCCATC TACCGCACCC TGATGGAGAC CCTGCCCGAT GCAGTCGCTC TTTACGACGG CTCTAAGGTG CTGTACCTCA ACCCGGTGGG CCTGCGCGGG CTGGGCTACG AACGCCTGGA GGAGGTGGTG GGCCAGCCCC TCACCAAATT TGTTCATCCC GACTCGCTGC CGCGCGTGGC CGAGCGGGTG CAGCGCATTC TGGGAGGGGA GCGCGATGGC CTCGAGGAGG TTCGCCTCGT TACCCGCGAT GGCCGCGTGC TCGAGGTTGA AGCCCAGGGG GTGCGGGTGC AGATTGCAGG CCACGAGCAG GTTTTGATCT CCATCCGCGA TGTGGGCGAG CGCAAGCGCC AGCAGGCCCG CATCGAGTAC CTGGCCTACC ACGACCCCCT CACCGACCTC CCCAACCGCC GCAAGCTGTG GGCCGTGGCC GAGAGTATTT TTGTGGCCGA CCGGCGCAAG CGCGAGACCC CGGCCCTGAT CTACCTCGAT CTCGACAACT TCAAGCTGGT CAACGACACC CTGGGCCACC AGGTGGGCGA CGAACTCTTG CGCCAACTGG CCTTGCGCAT CAAAGGTACC TTGCGCCAGG ACGACCTGCT GGCCCGCATG GGCGGGGACG AGTTCGCGGT GCTGCTGCCC TCTGCTGACC GCAATTCGGC GATGGCCGCT GCTAGGCGCA TCGTTGAGGT TTTTGACCAT CCCTTCAATC TGGGGGAACA CGTCCTTCAC GCGCGGGCCA GCCTGGGGGT GGCGCTTTAC CCTGAGCACG GCCAGACCCT GGACGAGCTG GCCCGTGCGG CCGACGTGGC GATGTACCAG GCCAAGCAAG CCCAGACCCA GGTGGCCGTA TACGACCCCG CCCAGGACAT CAACTCCCTC GAGCGCCTCG AGACCATTCA GCGGCTCAGA AAAACCATTC AAGAAGGCCG CTTCCTCATC CAGTACCAGC CCATCCTGAA CATCGCTGAG CGCTACATCA ACAAGTGGGA AGCCCTGGTG CGCTGGGAGC ACCCCACCCG CGGCCTGCTG CGCCCGGCCG AGTTCGTGCC GCTGGCCGAG GAGTCGGGCC TGATTGGCGA ACTGGATCTG GCCGTGCTGA AACAGGCGGT GCAGGATCAG AAGCGGCTGG GGGGTGAGCT GACCATCAAC TTTTCAGCTG TCACGCTGGC CCACCCCAAC TGGGTGCGGG AAGTGGTGCG TGCCCTGGTG GACGAGGCCC TGCAGCCCAG CCTGTTGTGG CTCGAGATCA CCGAGTCGGC CCTGCTGCCC GAGCGGCAAA AGTGGCTGGG GGGGCTGGTG GCGTTGCGCG GTCTGGGCGT GCGGGTGGCC CTGGACGACT TTGGCATGGG CTACTCCTCG CTGGCCCACC TCAAGCAGGT GCCAGTAGAC CTGATCAAAA TTGACAAAAG CTTTGTGGCA GAGATCGGGC TAAGCCAGAC CTCGGAGGAC ATCCTGCGGG CCATGCTGCA ACTGGCCAGC GCCTTTGGCC TCAAGACCCT GGCCGAGGGG GTGGAGAACC GAACCCAGCT CGAGTGGCTG GCCCGCCACG GCTGCCACTA TGCCCAGGGC TACTACATCG GCCTGCCGGT CGCGGTGGAG CAGGCGGTCG AGGCTGCTTT TACCAAAGCC TATTGA
|
Protein sequence | MYVQISTWLR PRRLELLVGL GFMLVYVLAF PLLYRSLGHG ALHLALPGVA LLSWGLGLWG ALGVGLALPL LHIALLDLVG VPWNANQDVV LVVGAVGLLT CLVVGLFRFQ YDRRWAAEVA MQESQAQAEA RNLELALYSK VRDGLARDLE PLALMRGVVD ALQEHPRFDS VAAYRPEEAC LRLLWAGGKQ TLPEQFEPTH EIVHRAAHLA ETVVMYSTEE RSKAGLLGER SLVAVPLPVK GKVVGVLVVG SAHTDLEPRD VRFLEGVAGQ LSLAIDRAQV YEALREQEAI YRTLMETLPD AVALYDGSKV LYLNPVGLRG LGYERLEEVV GQPLTKFVHP DSLPRVAERV QRILGGERDG LEEVRLVTRD GRVLEVEAQG VRVQIAGHEQ VLISIRDVGE RKRQQARIEY LAYHDPLTDL PNRRKLWAVA ESIFVADRRK RETPALIYLD LDNFKLVNDT LGHQVGDELL RQLALRIKGT LRQDDLLARM GGDEFAVLLP SADRNSAMAA ARRIVEVFDH PFNLGEHVLH ARASLGVALY PEHGQTLDEL ARAADVAMYQ AKQAQTQVAV YDPAQDINSL ERLETIQRLR KTIQEGRFLI QYQPILNIAE RYINKWEALV RWEHPTRGLL RPAEFVPLAE ESGLIGELDL AVLKQAVQDQ KRLGGELTIN FSAVTLAHPN WVREVVRALV DEALQPSLLW LEITESALLP ERQKWLGGLV ALRGLGVRVA LDDFGMGYSS LAHLKQVPVD LIKIDKSFVA EIGLSQTSED ILRAMLQLAS AFGLKTLAEG VENRTQLEWL ARHGCHYAQG YYIGLPVAVE QAVEAAFTKA Y
|
| |