Gene Mrub_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2168 
Symbol 
ID8880277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2216076 
End bp2218571 
Gene Length2496 bp 
Protein Length831 aa 
Translation table11 
GC content66% 
IMG OID 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 
Protein accessionYP_003507942 
Protein GI291296544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.273298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTACGTGC AGATAAGTAC CTGGTTAAGG CCGCGCAGGC TCGAGCTGCT GGTGGGCTTG 
GGATTCATGC TGGTGTATGT GCTGGCGTTT CCCCTCCTGT ACCGAAGCCT CGGCCACGGG
GCGCTGCACC TGGCTTTGCC AGGGGTGGCC CTGCTGAGCT GGGGGCTGGG CCTGTGGGGT
GCGCTGGGGG TGGGCCTGGC CTTGCCCCTC TTGCACATCG CGTTGCTCGA CCTGGTGGGG
GTGCCGTGGA ATGCAAATCA GGACGTGGTG CTGGTGGTAG GGGCGGTGGG CTTGCTGACC
TGTTTGGTGG TGGGGCTGTT TCGATTCCAG TACGACCGCC GCTGGGCCGC CGAGGTGGCC
ATGCAGGAGA GCCAGGCCCA GGCCGAGGCG CGTAACCTCG AGCTGGCCCT TTACTCCAAG
GTGCGCGATG GGCTGGCCCG CGACCTCGAG CCGCTGGCCC TGATGCGCGG GGTGGTGGAT
GCCCTGCAGG AACACCCGCG CTTCGACAGC GTCGCCGCCT ACCGGCCCGA AGAGGCCTGC
TTGCGCCTGC TCTGGGCCGG GGGCAAGCAA ACCCTACCCG AGCAGTTTGA GCCCACCCAC
GAGATCGTGC ACCGGGCGGC CCACCTGGCC GAAACGGTGG TGATGTACAG CACCGAGGAG
CGCAGCAAAG CCGGCCTGCT GGGCGAGCGC AGCCTGGTGG CGGTTCCGTT GCCGGTCAAG
GGCAAGGTGG TGGGGGTGCT GGTGGTGGGC AGTGCCCATA CCGACCTCGA GCCGCGCGAC
GTGCGTTTTC TGGAGGGGGT GGCGGGGCAG CTCAGCCTGG CTATTGACCG GGCCCAGGTC
TACGAGGCTC TGCGCGAGCA GGAGGCCATC TACCGCACCC TGATGGAGAC CCTGCCCGAT
GCAGTCGCTC TTTACGACGG CTCTAAGGTG CTGTACCTCA ACCCGGTGGG CCTGCGCGGG
CTGGGCTACG AACGCCTGGA GGAGGTGGTG GGCCAGCCCC TCACCAAATT TGTTCATCCC
GACTCGCTGC CGCGCGTGGC CGAGCGGGTG CAGCGCATTC TGGGAGGGGA GCGCGATGGC
CTCGAGGAGG TTCGCCTCGT TACCCGCGAT GGCCGCGTGC TCGAGGTTGA AGCCCAGGGG
GTGCGGGTGC AGATTGCAGG CCACGAGCAG GTTTTGATCT CCATCCGCGA TGTGGGCGAG
CGCAAGCGCC AGCAGGCCCG CATCGAGTAC CTGGCCTACC ACGACCCCCT CACCGACCTC
CCCAACCGCC GCAAGCTGTG GGCCGTGGCC GAGAGTATTT TTGTGGCCGA CCGGCGCAAG
CGCGAGACCC CGGCCCTGAT CTACCTCGAT CTCGACAACT TCAAGCTGGT CAACGACACC
CTGGGCCACC AGGTGGGCGA CGAACTCTTG CGCCAACTGG CCTTGCGCAT CAAAGGTACC
TTGCGCCAGG ACGACCTGCT GGCCCGCATG GGCGGGGACG AGTTCGCGGT GCTGCTGCCC
TCTGCTGACC GCAATTCGGC GATGGCCGCT GCTAGGCGCA TCGTTGAGGT TTTTGACCAT
CCCTTCAATC TGGGGGAACA CGTCCTTCAC GCGCGGGCCA GCCTGGGGGT GGCGCTTTAC
CCTGAGCACG GCCAGACCCT GGACGAGCTG GCCCGTGCGG CCGACGTGGC GATGTACCAG
GCCAAGCAAG CCCAGACCCA GGTGGCCGTA TACGACCCCG CCCAGGACAT CAACTCCCTC
GAGCGCCTCG AGACCATTCA GCGGCTCAGA AAAACCATTC AAGAAGGCCG CTTCCTCATC
CAGTACCAGC CCATCCTGAA CATCGCTGAG CGCTACATCA ACAAGTGGGA AGCCCTGGTG
CGCTGGGAGC ACCCCACCCG CGGCCTGCTG CGCCCGGCCG AGTTCGTGCC GCTGGCCGAG
GAGTCGGGCC TGATTGGCGA ACTGGATCTG GCCGTGCTGA AACAGGCGGT GCAGGATCAG
AAGCGGCTGG GGGGTGAGCT GACCATCAAC TTTTCAGCTG TCACGCTGGC CCACCCCAAC
TGGGTGCGGG AAGTGGTGCG TGCCCTGGTG GACGAGGCCC TGCAGCCCAG CCTGTTGTGG
CTCGAGATCA CCGAGTCGGC CCTGCTGCCC GAGCGGCAAA AGTGGCTGGG GGGGCTGGTG
GCGTTGCGCG GTCTGGGCGT GCGGGTGGCC CTGGACGACT TTGGCATGGG CTACTCCTCG
CTGGCCCACC TCAAGCAGGT GCCAGTAGAC CTGATCAAAA TTGACAAAAG CTTTGTGGCA
GAGATCGGGC TAAGCCAGAC CTCGGAGGAC ATCCTGCGGG CCATGCTGCA ACTGGCCAGC
GCCTTTGGCC TCAAGACCCT GGCCGAGGGG GTGGAGAACC GAACCCAGCT CGAGTGGCTG
GCCCGCCACG GCTGCCACTA TGCCCAGGGC TACTACATCG GCCTGCCGGT CGCGGTGGAG
CAGGCGGTCG AGGCTGCTTT TACCAAAGCC TATTGA
 
Protein sequence
MYVQISTWLR PRRLELLVGL GFMLVYVLAF PLLYRSLGHG ALHLALPGVA LLSWGLGLWG 
ALGVGLALPL LHIALLDLVG VPWNANQDVV LVVGAVGLLT CLVVGLFRFQ YDRRWAAEVA
MQESQAQAEA RNLELALYSK VRDGLARDLE PLALMRGVVD ALQEHPRFDS VAAYRPEEAC
LRLLWAGGKQ TLPEQFEPTH EIVHRAAHLA ETVVMYSTEE RSKAGLLGER SLVAVPLPVK
GKVVGVLVVG SAHTDLEPRD VRFLEGVAGQ LSLAIDRAQV YEALREQEAI YRTLMETLPD
AVALYDGSKV LYLNPVGLRG LGYERLEEVV GQPLTKFVHP DSLPRVAERV QRILGGERDG
LEEVRLVTRD GRVLEVEAQG VRVQIAGHEQ VLISIRDVGE RKRQQARIEY LAYHDPLTDL
PNRRKLWAVA ESIFVADRRK RETPALIYLD LDNFKLVNDT LGHQVGDELL RQLALRIKGT
LRQDDLLARM GGDEFAVLLP SADRNSAMAA ARRIVEVFDH PFNLGEHVLH ARASLGVALY
PEHGQTLDEL ARAADVAMYQ AKQAQTQVAV YDPAQDINSL ERLETIQRLR KTIQEGRFLI
QYQPILNIAE RYINKWEALV RWEHPTRGLL RPAEFVPLAE ESGLIGELDL AVLKQAVQDQ
KRLGGELTIN FSAVTLAHPN WVREVVRALV DEALQPSLLW LEITESALLP ERQKWLGGLV
ALRGLGVRVA LDDFGMGYSS LAHLKQVPVD LIKIDKSFVA EIGLSQTSED ILRAMLQLAS
AFGLKTLAEG VENRTQLEWL ARHGCHYAQG YYIGLPVAVE QAVEAAFTKA Y