Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1967 |
Symbol | |
ID | 8880076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 2018653 |
End bp | 2019873 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | phage head morphogenesis protein, SPP1 gp7 family |
Protein accession | YP_003507743 |
Protein GI | 291296345 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.391053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTGGA AGGTGCGGGC TGACCCGCTG CGCTTTGAAG AGGCCGAGGC CTTTCTTCGC CAGAAGGTGC CCCTCACCCA GGAGGAATAC CGCTCTCTAA CACTGCAAGA GGCGCAGCAG GCCTTCACCG TGGCGGGGGT GGCCCAGCTT GACCTGATTC ACGAAATCCT GCAGTCCCTT CAGACCGCGA TAGAGGCAGG CACCCCCTAC GAGGAGTGGG CCCGTTCCAT CGGGCCCCGG CTTTCGGCGG CATGGGGAGG GACCAAACCC TGGCGGCTGG AGTTGATCTT TCGACAAAAC ATTCTGGGAG CATACGCTGC TGGGCGCTAC GAGCAACAGA CCGATCCTCA GGTGCGTTCG GCTCGTCCCT ACTGGATGTA CGATGCGGTG CTGGACTCGG GCACCACCCC CATCTGCCGG GGCCTGAACG GCGTGATTCG ACCAGCAGAT GACCCCATAT GGGAGCGCAT ATATCCCCCC AACCACTTCG GCTGCAGGGC AGGGGTGCGG AGCCTGACCG CGCGGGAAGC GGAGGCCAGG GGAGGGGTAA GCCCACTGCC TCCCGGGCTG GAGGTGCCGC CAGGGTTCGC CCGGCCCCCC ACAGCAAGAT GGGAGCCGGA CCCAGCCAAA TACTCACCTG AGCTTTGGGA AGCCCTGCAA GGCAAGCTAG CCGAGCGGAT TGAGATTGGC CGGGAGATTC TGGAGCTGCG GGGGCAGGTA AGCGTCCGGG AGAGAGACCG AATTTTGCGG GGTCTGGAAG GGCTGAGATT AAACCGCTGG ATGGAACAAA ATCCTATCCG GACGCTCGAG ATTACCGCAA ACCTTACAAA CCGTATGGGT GACTACGACC GACTTACGCA GACCATCCGG CTGCTATATC CCAGACCCGA CGGAAGTTGG GCCGACGAAA AGCCGTTGGG CCAACTGCGG GCGGTTTCGA CCAAAGGTAG CTCGGCCCTC CAGGCCGCAG CAATTACTCT GGTACACGAG TTCGGGCATC ACCTGTACGA AGCGATGCGA GAAGAGACGG AGAACCGACT TTTTGCCAGG TACATTCAAG TCAAAAAGGA GGGCCGATTT GTCTCGCTTC GGGCAAGAGA CGGAGTGCTT GAGTGGTTTT CGGAGTCTCT GGCTGCCCAC CGGTTCTTTC GGAGGGATTT TCGCAAGTTT GACCCGGCCA CATCTGCTAT TATTCAGGAT GTGTTGGCTC GTCTGCGTTG A
|
Protein sequence | MAWKVRADPL RFEEAEAFLR QKVPLTQEEY RSLTLQEAQQ AFTVAGVAQL DLIHEILQSL QTAIEAGTPY EEWARSIGPR LSAAWGGTKP WRLELIFRQN ILGAYAAGRY EQQTDPQVRS ARPYWMYDAV LDSGTTPICR GLNGVIRPAD DPIWERIYPP NHFGCRAGVR SLTAREAEAR GGVSPLPPGL EVPPGFARPP TARWEPDPAK YSPELWEALQ GKLAERIEIG REILELRGQV SVRERDRILR GLEGLRLNRW MEQNPIRTLE ITANLTNRMG DYDRLTQTIR LLYPRPDGSW ADEKPLGQLR AVSTKGSSAL QAAAITLVHE FGHHLYEAMR EETENRLFAR YIQVKKEGRF VSLRARDGVL EWFSESLAAH RFFRRDFRKF DPATSAIIQD VLARLR
|
| |