Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1892 |
Symbol | |
ID | 8880000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1951011 |
End bp | 1953392 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | ATP-dependent protease La |
Protein accession | YP_003507669 |
Protein GI | 291296271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0163436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00257453 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTTTAG AACTACCGGT CATTCCATTG CGAAACACGG TCATCCTTCC CCACACCACC ACCCCGGTGG ACGTGGGCCG CGCCAAAAGC AAGCGTGCGG TTGAAGAAGC CATGGGGGCC GACCGGTTGA TCTTCCTGGT CGCGCAGCGC GACCCGGAGG TTGACGACCC CACCCCCGAC GACCTCTATA CCTGGGGTGT GCAGGCGGTG GTCAAACAGG CCATGCGCCT TCCCGACGGC ACCCTGCAGG TAATGGTGGA AGCCCGGGCC CGGGCCCAGG TCACGGAGTA TATTCCCGGC GCTTATCTGC GAGCCCGCGG TGAGGTCTTC AGCGAAATTT TCCCCATCGA CGAAGCGGTG GTGCGCGTGC TGGTGGAAGA GCTCAAGGAA GCATTCGACA AGTATGTAGC CAACCACAAA TCGCTACGGC TTGACCGCTA CCAGCTTGAA GCCGTCAAAG GTACCAGCGA CCCGGCCATG CTGGCCGATA CCATTGCCTA TCACGCCACC TGGACGGTGG CCGAGAAGCA GGAAATCCTC GAGCTCACCG ATCTTGAAGC CCGCCTCAAA AAGGTGTTGG GGTTGCTCAG CCGCGACCTC GAGCGCTTCG AGCTTGATAA ACGGGTCGCT CAGCGGGTCA AAGAACAGAT GGACACCAAC CAGCGCGAGT ACTACCTGCG CGAACAGATG AAGGCCATCC AGAAGGAGCT CGGTGGCGAG GATGGGCTCA GCGACCTCGA GGCCCTGCGC AAGAAGATCG AAGAAGTGGG CATGCCCGAG GCGGTCAAGA CCAAGGCCCT CAAGGAGCTC GACCGGCTGG AGCGCATGCA GCAGGGCAGC CCCGAGGCCA CCGTGGCCCG CACCTACCTG GACTGGCTCA CCGAGGTGCC CTGGAGCAAG GCCGACCCTG AGGTGCTGGA CATCAACCAC ACCCGGCAGA TTCTGGACGA GGATCACTAC GGCCTGAAGG ACGTCAAAGA ACGCATCCTG GAGTACCTGG CGGTGCGCCA GCTTACCCAG GGACTGGATG TGCGCAACAA AGCCCCCATC CTGGTGCTGG TGGGGCCGCC GGGGGTGGGC AAGACCTCGC TGGGCCGCTC CATCGCCCGC AGCATGAACC GCAAGTTCCA CCGCATCAGC CTGGGGGGCG TGCGCGACGA GGCCGAGATT CGCGGCCACC GCCGCACCTA CATCGGGGCC ATGCCCGGCA AGCTGATCCA TGCCATGAAG CAGGTGGGCG TGGTCAACCC CGTCATCTTG CTGGACGAAA TTGACAAGAT GAGCTCGGAC TGGCGCGGCG ACCCCGCCAG CGCCATGCTC GAGGTGCTCG ACCCCGAACA GAACAACACC TTCACCGATC ACTACCTCGA TGTGCCCTAC GACCTCTCGA AGGTCTTCTT CATCACCACC GCCAACACCC TGCAGACCAT CCCCCGGCCC TTGCTCGACC GCATGGAGGT CATCGAGATA CCGGGCTACA CCAACATGGA AAAGCAGGCC ATCGCCCGTC AGTACCTCTG GCCCAAGCAG CTCAGGGAAT CGGGTATGGA AGGCCGGATC GAGGTGACCG ATGCCGCCAT TCTGCGGGTG ATCTCCGAGT ACACCCGCGA GGCCGGGGTG CGGGGTCTCG AGCGCGAGCT GGGCAAAATT GCCCGTAAAG GGGCCAAGTT CTGGCTCGAG GGGGCCTGGG AGGGGCTGCG TACCATCGAT GCTGCCGACG TACCCGCTTA TCTGGGTATC CCCCGCTACC GCCCCGACAA AGCCGAGACC GAACCCCAGG TCGGCACCGC CCAGGGGCTG GCCTGGACGC CGGTGGGCGG CACCCTTCTG ACCATTGAGG TGGCCGCTGT GCCCGGCAGC GGCAAGCTCA GCCTGACCGG CCAGTTGGGT GAGGTTATGA AGGAGTCGGC CCAGGCCGCG CTAACCTATC TGCGGGCCCA TACGCAGACC TACGGCCTTC CCGAAGACTT TCATAACAAA GTAGACCTGC ACGTCCACGT GCCCGACGGG GCCACCCCCA AAGACGGCCC CAGCGCTGGC ATCACCATGA CCACCGCCAT CGCCAGCGCC CTCAGCCGTC GCCCGGTTCG TATGGACATC GCCATGACCG GCGAGGTTAG CCTGCGCGGC AAGGTGATGC CCATTGGCGG GGTAAAGGAA AAACTGCTGG CCGCCCACCA GGCAGGGATC CACAAAATTG TGCTGCCCAA GGACAACGAG GCCCAGCTCG AGGAGCTGCC CAAAGAGGTG TTGGAGGGGT TGGAGATCAA GCTGGTCGAG GACGTAGGGG AGGTGCTGGA ATACCTGCTG CTGCCCGAAC CTGCCATGCC CCCCGTGGTG CAGCCTAGCG ACAACCGCCA GCAGCCCGGC GCTGGGGCCT AA
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Protein sequence | MRLELPVIPL RNTVILPHTT TPVDVGRAKS KRAVEEAMGA DRLIFLVAQR DPEVDDPTPD DLYTWGVQAV VKQAMRLPDG TLQVMVEARA RAQVTEYIPG AYLRARGEVF SEIFPIDEAV VRVLVEELKE AFDKYVANHK SLRLDRYQLE AVKGTSDPAM LADTIAYHAT WTVAEKQEIL ELTDLEARLK KVLGLLSRDL ERFELDKRVA QRVKEQMDTN QREYYLREQM KAIQKELGGE DGLSDLEALR KKIEEVGMPE AVKTKALKEL DRLERMQQGS PEATVARTYL DWLTEVPWSK ADPEVLDINH TRQILDEDHY GLKDVKERIL EYLAVRQLTQ GLDVRNKAPI LVLVGPPGVG KTSLGRSIAR SMNRKFHRIS LGGVRDEAEI RGHRRTYIGA MPGKLIHAMK QVGVVNPVIL LDEIDKMSSD WRGDPASAML EVLDPEQNNT FTDHYLDVPY DLSKVFFITT ANTLQTIPRP LLDRMEVIEI PGYTNMEKQA IARQYLWPKQ LRESGMEGRI EVTDAAILRV ISEYTREAGV RGLERELGKI ARKGAKFWLE GAWEGLRTID AADVPAYLGI PRYRPDKAET EPQVGTAQGL AWTPVGGTLL TIEVAAVPGS GKLSLTGQLG EVMKESAQAA LTYLRAHTQT YGLPEDFHNK VDLHVHVPDG ATPKDGPSAG ITMTTAIASA LSRRPVRMDI AMTGEVSLRG KVMPIGGVKE KLLAAHQAGI HKIVLPKDNE AQLEELPKEV LEGLEIKLVE DVGEVLEYLL LPEPAMPPVV QPSDNRQQPG AGA
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