Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1822 |
Symbol | |
ID | 8879930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 1872780 |
End bp | 1874924 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | 3' exoribonuclease |
Protein accession | YP_003507600 |
Protein GI | 291296202 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000787127 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.140023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGG AAAATCCAAT ACCCCAGGCA CGACGCTACA GCGTGGACGT CGGGGGGCGC ACACTCACCA TCGAGACCGG CAAATACGCC AAGCACGTGT CCGGCTCGGT CTGGGTAACC TATGGCGAAA CCGTGGTGAT GGCGACCGCC CAGGCCTCCG ACGCGCCCAT TCAGGCCGAT TTTTTACCTC TGACGGTGGA GTTTGAAGAG CGGCACTACG CCGTCGGGCG CATTCCGGGT AGCTTTATGC GGCGGGAGGG GCGGCCAGGT GAAAAAGCCA TTCTCTCAGC CCGCCTGACC GACCGACCCA TCCGGCCCCT CTTCCCCAAG GGCTTCCGGC ACGAGGTGCA GGTGCTGCTG ACGGTGCTTT CCGCCGACCA GGAAAACACC CCGGACATCC TGGGGCCCAT CGCAGCCAGC GCGGCCCTGA TGCTATCGGA CATCCCCTGG GAGGGCCCCA TCGCCTCGGT GCGGGTAGGC CTGCAGAATG GGCGTCTGGT TTTGAACCCG GTGGCCCAGG AGGATAGCCA GCTCGATTTG GTGGTGGCCG GCTCCAAAGA GGCCATCATC ATGGTGGAGG CTGGCGCGCA AGAGGTCTCG GAAGACCGCC TGGTGGAGGC CCTCGAGTTC GCCCACCGGG CTATGCAGCC CATCCTGGAG CTGCAAGAGC AGATGCGGGC CGAGCTGGGC AAGCCCAAGT TTGCTTACGA GCCCCCGGCC AAACTGGACG CCGATACCCA GGCCACCCTG TACCAAAGGG CCGTGGAAAA AGGGCTTTCC AGCGTGCTGC AAACCGCCTC CAAGGGTGAG CGTTCGGCGG CCCTCGAGGC CTTCCGGCAG ACCTTGCTGG AAGAGCTGGT TCCCCCCGCC GAGGATGGCT CGGTAGACCA GGAGCGGCGC AAACTGGTGG CCGAGGGTTT TGATGAGGTG GTCAAACAGG AGCTGCGCCG GCTGATCCTA CAAGAAAACA AGCGGGCCGA TGGTCGCACC CCAACGCAGG TGCGCCCCAT CTGGATTGAA AGCAACGTGC TGCCTAAAAC GCACGGCTCG GCCATCTTCA GCCGGGGCGA GACCCAGGTG CTGGGCGTGG TCACGCTGGG CACCGGGCGC GATGCCCAGC TTGTGGACGA CCTCGGCATC GAGACCGAAG ACCCCTTCCT GGTGCACTAC AACTTCCCGC CCTACTCCAC CGGCGAGGTC AGGCGCCTGC GCGGGGTGAG CCGCCGCGAG GTGGGTCACG GCAACCTGGC CAAGCGCGGC TTGCGGGCCG TGCTGCCCTC CAGGGAGGAG TTTCCTTACA CCATCCGGGT GGTGGGCGAC GTGCTGGAGT CCAACGGCTC TTCCAGTATG GCCACGGTGT GCGCCGGTTG TCTGGCCTTG CTGGATGCTG GGGTTCCCCT CAAGAAGCAC GTGGCGGGGG TGGCCATGGG CCTGGTCAAG GAAGGTGAGC AGGCGGTGGT GCTCACCGAT ATCCTGGGCC TGGAGGACGC CCTGGGCGAC ATGGACTTCA AGGTCACGGG CACCCGCGAC GGCGTGACCG CGCTCCAGAT GGACATCAAG ATCAAGGGCC TGACCCCCGA GATCATGCGG GCAGCGCTGT ACCAGGCCCG CGAGGCCCGT TTGCACATCC TGAGCCTGAT GGAACGCGCC GTGCCCACCC ACCGCGCCGA GATGAAGCCC CATGTGCCCC GCATCCTCAC CCTCAAGGTC AACCCCGATA AAATTGGGGG GATTATCGGG CCTGGTGGCA AAAACATTCG CCAGCTCGAG GAGCTGGGGG TGGAAATCGA CATCGAGCAG GACGGCACCA TCCGGCTCTA CAGTGCCAGC GCAGCCGCAG CCGAAGAGGC CAAAGCCCGC ATCCTGGGCC AGACCGCCGA GGCCAAGGTG GGTGAGATCT ACGAGGGCAC CGTCACCCGG ATTACCAATT TCGGGGCTTT CATTGAAATT TTGCCGGGTA AGGACGGTCT GCTGCACATC AGCCAACTGG CTCAAGGGCG GGTGCAAAAG GTCGAGGATG TGCTTTCGCT GGGCCAGAAG ATTAAGGTCA AGGTCAACAG CATCGACGAG CAGGGGCGGG TGGATCTGAT TCGTCCGGAG CTCGAGGGCC TGATCGCCCC ACGCAAACCC CCTGTTCGAC GATAA
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Protein sequence | MNEENPIPQA RRYSVDVGGR TLTIETGKYA KHVSGSVWVT YGETVVMATA QASDAPIQAD FLPLTVEFEE RHYAVGRIPG SFMRREGRPG EKAILSARLT DRPIRPLFPK GFRHEVQVLL TVLSADQENT PDILGPIAAS AALMLSDIPW EGPIASVRVG LQNGRLVLNP VAQEDSQLDL VVAGSKEAII MVEAGAQEVS EDRLVEALEF AHRAMQPILE LQEQMRAELG KPKFAYEPPA KLDADTQATL YQRAVEKGLS SVLQTASKGE RSAALEAFRQ TLLEELVPPA EDGSVDQERR KLVAEGFDEV VKQELRRLIL QENKRADGRT PTQVRPIWIE SNVLPKTHGS AIFSRGETQV LGVVTLGTGR DAQLVDDLGI ETEDPFLVHY NFPPYSTGEV RRLRGVSRRE VGHGNLAKRG LRAVLPSREE FPYTIRVVGD VLESNGSSSM ATVCAGCLAL LDAGVPLKKH VAGVAMGLVK EGEQAVVLTD ILGLEDALGD MDFKVTGTRD GVTALQMDIK IKGLTPEIMR AALYQAREAR LHILSLMERA VPTHRAEMKP HVPRILTLKV NPDKIGGIIG PGGKNIRQLE ELGVEIDIEQ DGTIRLYSAS AAAAEEAKAR ILGQTAEAKV GEIYEGTVTR ITNFGAFIEI LPGKDGLLHI SQLAQGRVQK VEDVLSLGQK IKVKVNSIDE QGRVDLIRPE LEGLIAPRKP PVRR
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