| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1817 |
|---|
| Symbol | |
|---|
| ID | 8879925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1866982 |
|---|
| End bp | 1867971 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003507595 |
|---|
| Protein GI | 291296197 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.172258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.343692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTG GAGTGTTAAT CATCGCTGGC ATCGTTTTAC TGGCCGTTTT CTTATTCTTT
TACCTGGTAC CGGTGCCCCT ATGGATTACC GCGTTGTTTT CGGGGGTTAA CGTACCGCTA
ACCTCCCTGG TCGGCATGCG TTTCCGACGA ATCCCCCCGG CCAAAATTGT GAATCCCATG
ATTAAGGCCT TTAAAGCAGG CATTCCGGTC GAGACCGCCA AGCTCGAGGC CCAGTACCTG
GCCGGGGGCA ACGTAGACCG GGTGGTGGAT GCCCTGATTG CCGCCGACAA GGCCGGCATC
AAGCTGAACT TCGACCGCGC CGCCGCCATT GACCTGGCGG GGCGGGATGT GCTCGAGGCC
GTGCGGCTCT CGGTGAATCC CAAGGTAATT ACCAGCCCGA TGGTAGCGGG TATGGCCAAG
GACGGCATCC AGCTGCTGGC AACCGCCCGC ATCACCGTGC GGGCCAACAT TGACCGCCTG
GTGGGTGGGG CCGGCGAAGA AACCATCGTG GCCCGGGTGG GCGAGGGCAT CGTGGCCTCC
ATCGGCCAGT CGGAGGATCA CAAGCAGGTG CTCGAGCAGC CTGACCGTAT CTCCAAAACC
GTGCTAGCCA AAGGCCTGGA CGCCGGCACG GCTTTTGAAA TCCTATCGGT GGATATCGCC
GAGGTGGACG TGGGTAAAAA CATCGGGGCC CAGCTTCGCA CCGACCAAGC CGAGGCCGAC
AAGAAAATTG CCCAGGCCAA GGCCGAGGAG CGCCGCGCGA TGGCGGTGGC CCTGGAGCAA
GAAAACGCGG CCCTGGTAGA GGCCATGCGG GCCAAGCTGG TGGAGGCCCA AGCGGCCGTA
CCTTTGGCCC TGGCCGAGGC CCTGCGCAAC GGTCGCATAG GCGTTATGGA CTACTATCAG
CTTAAAAACA TTGAGGCCGA CACCGAGATG CGCGATTCCA TCAGCAAAGC CAGCGGCGGC
AGCACTTCCG ATGATGGTTC GCAACGCTAA
|
|---|
| Protein sequence | MEFGVLIIAG IVLLAVFLFF YLVPVPLWIT ALFSGVNVPL TSLVGMRFRR IPPAKIVNPM
IKAFKAGIPV ETAKLEAQYL AGGNVDRVVD ALIAADKAGI KLNFDRAAAI DLAGRDVLEA
VRLSVNPKVI TSPMVAGMAK DGIQLLATAR ITVRANIDRL VGGAGEETIV ARVGEGIVAS
IGQSEDHKQV LEQPDRISKT VLAKGLDAGT AFEILSVDIA EVDVGKNIGA QLRTDQAEAD
KKIAQAKAEE RRAMAVALEQ ENAALVEAMR AKLVEAQAAV PLALAEALRN GRIGVMDYYQ
LKNIEADTEM RDSISKASGG STSDDGSQR
|
|---|
| |