Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1592 |
Symbol | |
ID | 8879697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1624644 |
End bp | 1626329 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003507374 |
Protein GI | 291295976 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.185317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.745369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAC CTTGGCTAAA ACACTACGAC AAAGGCGTCC CCGCGGATGT GCAGGTGCCC GAGGTGCCCC TCTGGCAACT GTTGGCCGAC AGCGTCAAAA AGTATCCCGA TCACGTGGCC CTCGAGTTCA TGGGCAAGGT CATCGGCTAC CGGCAACTGT GGGAATCGGT GCTGAAGTTC GCCGGGGCGC TCAAGGCCCA GGGGGTGGGC CCGGGCGACC GGGTCGCCAT CATGCTGCCC AACAGCCCCC AGTTTGTGAT CGCCTTTTAC GGCACCCTGG TTGCCGGCGG CGTGTGCGTC AATATCAACC CCCTCTACAC ACCGCGCGAG CTACGCCACC AGCTCGCCGA TGCCGGGGCC GAAACCCTAG TGATCCTGGA TATGCTCTGG CCCCGGTACG CCGAAATAGA GGCCGAAGTA CCGGTCAAGC GCGTCTTTAC CACCGGCATC CAGGACTACC TGCCCTTCCC CAAAAACCTG CTTTTCCCGC TCAAGGCCCG GCGGGAAAAA CGCTGGGTGA ACCTGCCACA ACACCCCAAA CGGCTGGACT TTAGCAAAGC CCTGCGCAGT GCCACCCCAC TTACTGAGCC TTACCCCGCC AAGCCCGACG ATGTGGCCCT CCTGCAGTAC ACCGGGGGTA CGACAGGACT GTCCAAAGGA GCCATGCTCA CCCACCGCAA CCTGGTGGCT AACACCTACC AGAGCCTGGC CTGGGGTGGC GACGAGGTGA AGGCGCTCGA GGGCAAGGGG GTTATGCTGG GCGCCATCCC TTTTTTCCAC GTTTACGGCA TGACCGTAGC CATGAACTAC GGCCTGGCCG CTGGGTACAA ACTGGTGCTG CTGCCGCGCC CCGAGGTCAA GCCCTGCATC GAGGCCATCG AAAAGCACGG GGTTACCCAT TTCCCTGGCG TCCCCACACT CTACATCGGC TTCATCAACT TTCCCGGCAT CGAGAAGCGC AAGGTGGGCA CAGTCAAGGT CTGCATCTCT GGTTCGGCAG CGCTGCCGGT GGAGGTGGCT AAAAAGTTCG AGGCCCTCAC CGGTGGCAAG CTGGTGGAAG GCTATGGCCT CACCGAAGCG GCCCCCTGCA CCCACTGCAA CCCCCTGTCC GGGCAGCGGA AAATGGGCAG CATCGGCATT CCCATGCCGG GCGTTGATGC CAAGATTTTA GACGAGAACC TGCACGAACT ACCCCCGGGC GAAGTGGGTG AGCTGGCCGT TCGAGGGCCC AATATCATGC TGGGCTACTG GCAACGCCCC GACGAGACCA GCAAGACCAT CAAGATCGAC TGGCTCCTGA CCGGCGATAT GGCCCGGATG GACGAGGATG GCTACTTCTA CATCGTGGAT CGCAAGAAGG ACATGATTAT CGCGGGGGGC TACAACATCT ACCCACGCGA GGTAGAAGAG GTGCTGTTTG CCCACCCCGG TGTGGCCGAG GCCGCCGTGG TGGGGCTGCC CGACGAGTAC CGCGGCGAGA CCGTGGCGGC TTTCATTGTG CCCAAACCCG GCGTCAACCT TACCCAGGAA GAGCTGGACA AATACTGCCG CGAGAACCTG GCGGCCTACA AGGTTCCGCG CATCTACGAG TTCCGCAGCG AACTGCCCAA GAGCGCAGTG GGTAAGGTGC TGCGCCGCGA GCTGCGCGAG GCCGCCCTCA AGGAGCGCCA GAAGGTGGGC AGCTAG
|
Protein sequence | MSKPWLKHYD KGVPADVQVP EVPLWQLLAD SVKKYPDHVA LEFMGKVIGY RQLWESVLKF AGALKAQGVG PGDRVAIMLP NSPQFVIAFY GTLVAGGVCV NINPLYTPRE LRHQLADAGA ETLVILDMLW PRYAEIEAEV PVKRVFTTGI QDYLPFPKNL LFPLKARREK RWVNLPQHPK RLDFSKALRS ATPLTEPYPA KPDDVALLQY TGGTTGLSKG AMLTHRNLVA NTYQSLAWGG DEVKALEGKG VMLGAIPFFH VYGMTVAMNY GLAAGYKLVL LPRPEVKPCI EAIEKHGVTH FPGVPTLYIG FINFPGIEKR KVGTVKVCIS GSAALPVEVA KKFEALTGGK LVEGYGLTEA APCTHCNPLS GQRKMGSIGI PMPGVDAKIL DENLHELPPG EVGELAVRGP NIMLGYWQRP DETSKTIKID WLLTGDMARM DEDGYFYIVD RKKDMIIAGG YNIYPREVEE VLFAHPGVAE AAVVGLPDEY RGETVAAFIV PKPGVNLTQE ELDKYCRENL AAYKVPRIYE FRSELPKSAV GKVLRRELRE AALKERQKVG S
|
| |