Gene Mrub_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1553 
Symbol 
ID8879656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1587334 
End bp1587771 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003507335 
Protein GI291295937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000880157 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCACAC AGAGAGGGCT GCTCGAGCTG TTCAAGGTGG TTACCAGGGT TATCTTCAAC 
CTGGTTCTGG TGGCTTTGCT GATAGGGTTG CTGGTAAGCG TGGCCCGCAC CCTGCTGGAT
CTTGGCCTGG CCGTCAGCCA ACCCACGGTG CGGCTGGGCC TCAAGGATCT GGTCACCAAT
GTGTTGTCCT TGGTGATTGT GCTCGAGCTG GTGCGGGCGT TTGTAGACTA CTTCGAATTC
GACCGCATCC GGGCCGAGAT TTTGGTAGAA GTGGCGGTTG CCTTTGTGCT GCGCGAGATG
ATGCTGGGTT TGTTTGCCGG CGAAATCAAG GGGCTGGATA TTTTGGTTTG GAGCGCGGGC
ATTCTGGCTC TCATTGGGGC CAGGGCCTTG GCCATTGCAT TCCCTTACAG CAAGGGGCCC
GCGCGGTCTG GCCAGTAG
 
Protein sequence
MITQRGLLEL FKVVTRVIFN LVLVALLIGL LVSVARTLLD LGLAVSQPTV RLGLKDLVTN 
VLSLVIVLEL VRAFVDYFEF DRIRAEILVE VAVAFVLREM MLGLFAGEIK GLDILVWSAG
ILALIGARAL AIAFPYSKGP ARSGQ