Gene Mrub_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1533 
Symbol 
ID8879636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1567686 
End bp1568873 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content63% 
IMG OID 
Product2-oxoglutarate dehydrogenase E2 subunit, dihydrolipoamide succinyltransferase 
Protein accessionYP_003507315 
Protein GI291295917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.126409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.427317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAG AACTGAAAAT ACCTGCAGTT GGCGAGTCCA TCACCGAAGT TGAGATTGGT 
CAGTGGCTTA AGAAGGAAGG GGACACGGTT AAGGTTGATG AGCCCCTGGT GGAACTGGTT
ACCGATAAAG CCACCCTCGA GCTGCCCGCA CCGGTGGCCG GGCGGCTGAC CAAAATCCTC
ATCCCCAGTG GACAGGCCAA GGTGGGCGAT GTGGTAGCCC TGCTGGAAGA AGGCGCCGCC
GAAGCCTCGA GCGGCGCCCC CAGCCAGAGC ACCCCGGCCC CCAGCCAGGC CGCGGCCACC
GAGAGCAAGG TGATGCCGGC AGCCGAGCGA CTGGCGGCAC AGGCCGGCCT GCAGGCCTCG
AGCATTCCGG GTAGCGGCCC GGGCGGCCGG GTCTTGAAAG AAGACGTACA GCGAGCGGTA
ACCACACCGC CCCCCACCCC GCAACCCACG CCCAGCGCCC CGCCCGCCCC GCCAGTACAA
AAAGGCGAAC GCCGCGAGGA TGTGGTGCCC ATGACCCCCC TGCGCCGCCG CATTGCCGAG
CGTTTGCTGG CAGCCAAGCA GAATACCGCC ATGCTCACCA CCTTCAACGA GGCCGATATG
AGCGCGGTGA TGGAGCTGCG CAAGGAGTAC GGCGAGGCCT TCCAGAAGAA ATACGGCTTC
AAGCTGGGCT TTATGAGCTT TTTTGTGAAA GCGGTGGTGC AGGCCCTGCA GGAAATCCCG
CAGCTCAACG CCGAGATCCG CGGAACCGAT ATCGTTTACC ACCGCTACTA CGACATCGGC
ATCGCCGTGG GCGGGGGCGA GGGCCTGGTG GTACCGGTGA TTCGCGATGC CGACCGGCTC
TCGATGGCCC AGATTGAGGC GGTAATTGCC GACTTTGGAG CCAGGGTACG GGAAAAGAAA
ATCAAACCCG AAGAGTTGAT GGGCGGTACC TTCACCATCA CCAACGGGGG CATCTACGGC
TCGCTCAACT CCACGCCCAT TCTCAATCCG CCCCAGGTGG GCATCCTGGG CATGCACGCC
ATCGTCGAGC GTCCGGTTGC CAAAAACGGC GCAGTGGTCA TCCGCCCGAT GATGAACCTG
GCCCTTTCCT ACGATCACCG CATTGTGGAT GGGCGGGAGG CCGTCACCTT CCTCAAGCGC
ATCAAGGAAC TCATCGAAAA CCCCGTACGG CTAACCCTGG AAATCTAA
 
Protein sequence
MALELKIPAV GESITEVEIG QWLKKEGDTV KVDEPLVELV TDKATLELPA PVAGRLTKIL 
IPSGQAKVGD VVALLEEGAA EASSGAPSQS TPAPSQAAAT ESKVMPAAER LAAQAGLQAS
SIPGSGPGGR VLKEDVQRAV TTPPPTPQPT PSAPPAPPVQ KGERREDVVP MTPLRRRIAE
RLLAAKQNTA MLTTFNEADM SAVMELRKEY GEAFQKKYGF KLGFMSFFVK AVVQALQEIP
QLNAEIRGTD IVYHRYYDIG IAVGGGEGLV VPVIRDADRL SMAQIEAVIA DFGARVREKK
IKPEELMGGT FTITNGGIYG SLNSTPILNP PQVGILGMHA IVERPVAKNG AVVIRPMMNL
ALSYDHRIVD GREAVTFLKR IKELIENPVR LTLEI