Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1516 |
Symbol | |
ID | 8879617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 1548957 |
End bp | 1549955 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Transketolase central region |
Protein accession | YP_003507298 |
Protein GI | 291295900 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.349052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGCAG AGCGTGGTAC TCGAGTCCTG AACAACGTGC AGGCCATCAA CGAGGCCCTG GATCTGGCCC TGGCCAAAGA CGAACGGGTG GTGCTCTTTG GCGAGGACGT GGGCACCATG GGCGGGGTGT TCCGGGCCTC GGACGGGCTC GCGCAAAAGT ACGGCGAAAA GCGGGTCTTC GATACGCCCC TGGCCGAGAG CGGAATTGTG GGTTTCGGGA TTGGGCTGGC CATGGCCGGG CTGCGCCCGG TGGCCGAGAT ACAGTTCGCC GGGTTCTTAT ACCCCGCCCT CGACCAGATT CTTTCGCACC TGGGCCGGAT GCGCCACCGC ACCCGGGGCC GCTTTACCAT CCCCATGGTC ATCCGCGCCC CTTACGGCGG CGGGGTCAAA ACCCCTGAGC AGCACGCCGA CAGCCCCGAG GCCATCCTGG CCCACGTGCC GGGGGTCAAG ATGGTGATCC CCTCCTCGCC CGAGCGGGCC AAGGGACTGC TGCTGGCGGC CATCGAAGAT CCCGACCCGG TGTTTTTCCT GGAGGCCATC AAGCTCTACC GGGGCGTGAA GGCCGAGGTG CCGGAAGGCT ACTACACCCT ACCCCTGGGC CAAGCCCGGG TGGTGCGGGA GGGCAACGCC GCCAGCCTGT TCTGCTACGG CGGGATGGTG GAGGTCTGCC TCAAGGCCGC CGAGGTGGCC GCGCGGGAGG GGGTGGAGCT GGAGGTGGTG GACCTCGAGA CCCTAATACC CCTGGACACC CCCACCATCC TGGCCTCGGT GCAGAAAACC GGGCGCGCGG TGGTGGTCTA CGAGGCCATG CGCACGGGGG GCTTTGGCGC GGAAATCGCC GCCCGCATCG CCGAGGAGGC CCTGGACTAC CTGCAAGCCC CCATCCTGCG GGTGGCCGGC TGGGACGCCC CCTACCCCCC GTTCAGCGCG GTGGAAAACT TCTACCGCCC GGACGCCAGG CGGGTTCTGG AGGCGGTGCG TAGGGTGCTG GAACACTAA
|
Protein sequence | MIAERGTRVL NNVQAINEAL DLALAKDERV VLFGEDVGTM GGVFRASDGL AQKYGEKRVF DTPLAESGIV GFGIGLAMAG LRPVAEIQFA GFLYPALDQI LSHLGRMRHR TRGRFTIPMV IRAPYGGGVK TPEQHADSPE AILAHVPGVK MVIPSSPERA KGLLLAAIED PDPVFFLEAI KLYRGVKAEV PEGYYTLPLG QARVVREGNA ASLFCYGGMV EVCLKAAEVA AREGVELEVV DLETLIPLDT PTILASVQKT GRAVVVYEAM RTGGFGAEIA ARIAEEALDY LQAPILRVAG WDAPYPPFSA VENFYRPDAR RVLEAVRRVL EH
|
| |