Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1491 |
Symbol | |
ID | 8879592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 1522630 |
End bp | 1524138 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | lysyl-tRNA synthetase |
Protein accession | YP_003507273 |
Protein GI | 291295875 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00494369 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCCTGAGT ACAGCGAACA GACCCAACAA CGCCTAGCCA ACCTCGAGGC CCTGGCCGAA GCCGGCTTCG AGCGCTTCCC CTACCGCTTC CCCAAGACCC ACGACGCCGC TCAGATTCTG GCCGCCCACG CCGGGGCCGC CCCCCAGCAG GAGTGGCCCG AGGAAGAGGT GCGCGTAGCG GGCCGCCTGA TGACCTTCCG TCACATGGGC AAGGCCAGCT TTGCCCACCT GCAAGACCAG AGCGGGCGCA TTCAGCTCTA CCTGGCCCGC GACATCACCG AGCATTACGA CCTGATCAAA AAACTCGATA TCGGCGATAT TTTGGGGGTT GAGGGTACGG TTTTCACCAC CAAAACCGGC GAGATAACCA TCAAGGTTCG AAAATTCGTA CCCCTGGTCA AGTCGCTCCA CCCCCTGCCC GACAAGTGGC ACGGCATCCG CGACGTGGAA ACCCGCTACC GCCAGCGCTA CCTCGACCTG ATCCAGAACC CCGAGGTGCG GGAGGTGTTT CGCATTCGCA GCCGTATGGT GCGCTACATC CGCGATTTCT TCGACCAGCG GGGCTTTTTG GAGGTTGAAG GCCCTACCCT GCAGGCCATC GCCGGCGGCA CCGAGGCCAA GCCCTTCAAA ACCTTCCACA ACGCGCTCGA TCACGAGTTC AACCTGCGCA TTGCCCTCGA GCTGCACCTC AAGCGCCTGC TGGTAGGCGG TTTCGAGAAG GTCTTCGAGA TTGGCCGCAA CTACCGCAAC GAAGGCATCT CGGTCAAGCA CAACCCCGAG TTCACCATGC TCGAGGCCTA CTGGGCCTAT GCCGACTACC ACGACATGAT GGCCCTGGTC GAAGACCTGC TCTCGGGCCT GGTGCAGCAC CTCTTTGGCA GCACCCAGGT GCAGTATGGT GAGCATCTGA TTGACTTTGC CAAGCCCTTC AAGCGCATAG ATTTTGTTGC CACCCTCAAA GAGCGAGCCG GCCTCGACTT CGACCCCACC GACCTCGAGC GCCTGCGCAC CTGGGCCGAT CAAAAGCACC CGGAGCTGCG CAGCGTACCC AGTTACAAAT TGCTGGACAA GCTGTTCGGG CACTACGTGG AGCACACCCT GATTCAGCCC ACGTTTGTGG TGGATGTGCC CTTGGCCATC AGCCCACTGG TCAAGCGTCA CCGCGACCCC AGCAAGACCA ACCTCACCGA GCGCGCCGAC CTATTTGTGG CCGGCTTCGA GATCTCCCCT ATTTATTCTG AGCTCAACGA TGCCCTCGAT CAGCGCGCGC GCTTCCAGGA ACAGGCTAAG CGCCGCGAGG CCGGCGACGA CGAGGAACCG GAGATCGACG AAGACTTTTT GCTGGCCCTC GAGTACGGCA TGCCCCCCGC CGCCGGTATG GGCCTGGGCA TAGACCGGCT GGCTATGGTA CTCACCAACC AAGAAAGCAT CCGCGACGTA ATCCTCTTCC CTCTGCTCAA GCCGCGTAAA GAAGCACCCG ACCTCGAGGA ATCCACCGAC CAGGAGTGA
|
Protein sequence | MPEYSEQTQQ RLANLEALAE AGFERFPYRF PKTHDAAQIL AAHAGAAPQQ EWPEEEVRVA GRLMTFRHMG KASFAHLQDQ SGRIQLYLAR DITEHYDLIK KLDIGDILGV EGTVFTTKTG EITIKVRKFV PLVKSLHPLP DKWHGIRDVE TRYRQRYLDL IQNPEVREVF RIRSRMVRYI RDFFDQRGFL EVEGPTLQAI AGGTEAKPFK TFHNALDHEF NLRIALELHL KRLLVGGFEK VFEIGRNYRN EGISVKHNPE FTMLEAYWAY ADYHDMMALV EDLLSGLVQH LFGSTQVQYG EHLIDFAKPF KRIDFVATLK ERAGLDFDPT DLERLRTWAD QKHPELRSVP SYKLLDKLFG HYVEHTLIQP TFVVDVPLAI SPLVKRHRDP SKTNLTERAD LFVAGFEISP IYSELNDALD QRARFQEQAK RREAGDDEEP EIDEDFLLAL EYGMPPAAGM GLGIDRLAMV LTNQESIRDV ILFPLLKPRK EAPDLEESTD QE
|
| |