Gene Mrub_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1284 
Symbol 
ID8879379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1308988 
End bp1309827 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content61% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003507066 
Protein GI291295668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.437993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.22836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTTG CGGAGGCAAT CAATGCCTTT GTGCGCTGGC TGGTTCAAAA CTACGGAGAG 
ACCTTTGAGG CGATTTCTCA GGGCCTCCTG AGCTTCCTTC TGTTCTTTGA GGGGTTGTTG
CGGGATCTTT CCTGGTTCTG GGTAGCCGGC TTGGTGTTTC TGGCGGGCTG GTGGTTGAGC
CGCCGCCTGG TCTTTGCCCT GGGCATGGGG CTTGGCGTGT GGCTGATAGA GGCGCTGGGT
CTGTGGGACA AAGGCATGCA GACCCTGGCC CTGGTGCTAG CTGCGGTGGC GGTTTCGGTA
ATTATCGGCC TCCCTCTGGG AATCCTGATG GGGCGGAGCG ACCGCTTCCG CGGGTTCATG
CTGCCAATTC TGGACGCCAT GCAGACCATG CCCAGTTTCG TGTATCTGAT TCCGGCTCTG
CTGCTCTTTG GTCTGGGAAA GGTTCCAGCC CTGATCGCCA CGGTCATCTA TGCGGTTCCC
CCCATGATCC GCCTTACCGA CCTTGGGCTG CGCATGGTGC AGCGGGAGGT TATGGAGGCT
GCCGAGGCCT TCGGGGCCAC TTCGTGGCAG CGGCTGCTTA AGGTGGAGCT GCCTCTGGCC
TTGCCCAACC TCCTGGCAGG GTTGAACCAG ACCACCATGA TGGCCCTGGC GATGGTGGTT
ATCGCCTCTA TGATTGGGGC TCGAGGTCTC GGGGAGGAGG TTCTTCTGGG AATCCAGCGC
CTGGATGTGG GCCGGGGCGC GGTGGCAGGG GTGGCCATTG TGGCCCTGGC CATCGTGCTG
GATCGACTGA TTCAGGCAGC CGGGCAACGG GCCGTTAAAC GTTACCGGGA GGAGCGATGA
 
Protein sequence
MDLAEAINAF VRWLVQNYGE TFEAISQGLL SFLLFFEGLL RDLSWFWVAG LVFLAGWWLS 
RRLVFALGMG LGVWLIEALG LWDKGMQTLA LVLAAVAVSV IIGLPLGILM GRSDRFRGFM
LPILDAMQTM PSFVYLIPAL LLFGLGKVPA LIATVIYAVP PMIRLTDLGL RMVQREVMEA
AEAFGATSWQ RLLKVELPLA LPNLLAGLNQ TTMMALAMVV IASMIGARGL GEEVLLGIQR
LDVGRGAVAG VAIVALAIVL DRLIQAAGQR AVKRYREER