Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1041 |
Symbol | |
ID | 8879130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1036622 |
End bp | 1038265 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | type II secretion system protein E |
Protein accession | YP_003506825 |
Protein GI | 291295427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGAAAC TCAAGCTCGG TGAGCTGCTG GTTAGGCTGG GAAAGCTCAC GCCAGAGCAG CTTTCCATGG CCCTGGAGGA GCAGCAAAGG CGGCAGGAAC CATTGGGGCA GGTGTTGCTC CAGAAGGGCT GGATACGCGA ATCCGAGCTG TACCAGGTTT TGGCTGATCA ACAGCGAGCG CCGTTGATTA GCCTTGAGGC GGTCGAAATA CAGCCGGAAG CCCTAAACCT TCTGGATCGG CGTTTTGCTC GTGAGAAGCA GGTGCTGCCT CTGCGCCTGG ATGGGGCTCG CCTACACGTG GCGATGGCCC ACCCTGCCGA CCTGGCTTTG CTGGATGAGC TGCGCTTTCG TACCGGTAAG GAGATCGTGC CTTACCTAGC CTCTGACCGG GAAATTTTGC AGACACTGGA CGATTTGTTG CAACCCCAGC AGTCCCTCGG TGCCGTGCAA ATGGAGGCTC GACCAGGCCC CGATCTGACC ATCGAGCAAG CGCCCGCGAT CGAGCTGGCC GATGAGCTGG TGCGCAAGGC CCTGGGTGCG CGGGCCAGTG ATTTGCACTT AGAGCCCCAG GAAAGCTATG TCCGGGTGCG TATCCGGGTG GACGGGGTTT TGCAGGAGAT TCACAGGCTG GATAAGGGGT TGGAGGCCCC CCTGGTGGCC CGCTTCAAGG TGCTGGCTGG TATGGATATT GCAGAAAAGC GGCGGCCGCA GGATGGGCAC TTTACCTACA CCTTCGGCAA TCGCCGCCAT GAACTGCGCA TAGCCAGCGT GGGCACACTT TTTGGCGAAC GTCTGACGGT GCGCATTATC TACCCCGATG CGGTGCGGCG GGGGTTGGCC GATCTGGGGA TGCTACCGGA GGATCTGAAG CGCTTTGAAG GGCTGCTGCG TTCCACCAGC GGTATTCTGC TGGTGACCGG CCCCACCGGC AGCGGCAAGA CCACCACCCT CTACGCCGCT ATGCAGCACC TGTACACTTC GGAGAAGTGT TTTCTGACCA TTGAAGATCC GGTCGAGGTG CCCCTCGAGG GAATCAGCCA GATTCCTGTA CAACCCAAGA TCGATCTGGA TTTTGGTGAA GCACTGCGTT CGGTGCTGCG GCAGGATCCG GATGTTATCT TGGTGGGAGA AATTCGCGAC CGCACAACCA TTGACACGGC ACTGCGAGCG GCCCTTACCG GGCACCTGGT GCTGGCTACC TTGCACGCCA ACGATGCCCT GTCCACCCCC ATCCGGCTGC TCGAGATGGG GGCTGAGCCT TATTTGGTGG GTGCAACCTT ACTGGGAGTG GTGGCACAGC GATTGGTTCG CCAGGTCTGT CCCCAGTGTG CTGAGGCCTG CCCGACTCCT ACTGAGGCCC GCTTGCTTTG GGGCGAGGCT GCGCCGGTGC ATGAATATCG AGGCCAAGGT TGTGCCTATT GTCGCGGCAC TGGGTTTTCT GGTCGGATGG GACTTTACGA GATCTATAGC CTGGATCAGG AAGCACGCCA CCTGATTGCC TCGGGGGGAT CGCTGGCCGA GCTACAGGCG CGGGCAGCCA GCAGCCAGCA TAAAGACCTT TGGGCCAAGG CGCTGGTGGC GGTGCGCGAT GGGCGCACCA CCACCTCCGA GGTTTTGCGA GCCCTGGGCT GGCGGGAGGT GTGA
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Protein sequence | MEKLKLGELL VRLGKLTPEQ LSMALEEQQR RQEPLGQVLL QKGWIRESEL YQVLADQQRA PLISLEAVEI QPEALNLLDR RFAREKQVLP LRLDGARLHV AMAHPADLAL LDELRFRTGK EIVPYLASDR EILQTLDDLL QPQQSLGAVQ MEARPGPDLT IEQAPAIELA DELVRKALGA RASDLHLEPQ ESYVRVRIRV DGVLQEIHRL DKGLEAPLVA RFKVLAGMDI AEKRRPQDGH FTYTFGNRRH ELRIASVGTL FGERLTVRII YPDAVRRGLA DLGMLPEDLK RFEGLLRSTS GILLVTGPTG SGKTTTLYAA MQHLYTSEKC FLTIEDPVEV PLEGISQIPV QPKIDLDFGE ALRSVLRQDP DVILVGEIRD RTTIDTALRA ALTGHLVLAT LHANDALSTP IRLLEMGAEP YLVGATLLGV VAQRLVRQVC PQCAEACPTP TEARLLWGEA APVHEYRGQG CAYCRGTGFS GRMGLYEIYS LDQEARHLIA SGGSLAELQA RAASSQHKDL WAKALVAVRD GRTTTSEVLR ALGWREV
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