Gene Mrub_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1031 
Symbol 
ID8879120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1027434 
End bp1028726 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content66% 
IMG OID 
Productpolysaccharide deacetylase 
Protein accessionYP_003506815 
Protein GI291295417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.90284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCT GGAAGGGGCC TCAATTGTTT CAGACCCCCT TCATCTGCTG GGCGATGCTA 
GAGGGTATGA GGCCTTGGGT ATGCTTACTG CCGTGGGCGT TGGGGCTGGT GCTGGCCCAG
CCGAGCAGCC CGACGCCGCT TCCCCCGGTG CAGGCCATTC CGCCCGGCGA GATGCAGCCG
CTGGCACCCG GTCAGCGGCC AGCGCCCACA CTACCCCAGA TCGTTCTCAA CCCGCCCATC
CGCTTCGTGG AGCGGATCGC CTGGGCCTCC AACGGTTTTG TGGAAGCGGC CGAGGCCCTG
GTGCTGATTC CGGAGGCCTC CACCACCCCT AGCTTTATGC TCACCAAGGC CCAGCGGGTG
GTGGCCGAGA CCTTTGCGGC CCGGCCCTCC CTGAGCTATG TGGATGTCTC GATTTATAGC
CGGAGGGAGT ACGCGGGCTT TGGAGGCCCC TTGCCCCGTT TTACCGCTTC GGTCTCGCGG
GCCAGGCTCA ACGAGTTTTT GCGCCTGAAC CTGAGCAACT TTTTGCAGTT TGACCACCTC
TGGATCAAGC CGCAGGACGC TTTTTATGGC CCACCCGCGC CCGTAACCGA CGAGCTCGAG
CTCACCCCCC AGTTCCAGGG CACCCGGGCC CAGCTCCGCG CCCAGCAGCT CGAGCAGACC
GTGGCCAGCC AGCAGGGCGG GGTGGTGGGC AACCGCCTTT TTCACGGCGA CCCCAGGCAG
CGCGTGGTGG CCCTGACCTT CGACGATGCG CCCCACCCCC TGTTCGAGCC GCTGCTCCTC
GACACCCTGC GCCGGGCGGG TGTGCGGGCC ACCTTCTTCT GCATTGGCCG CAACGCCGAG
GCCTACCCCT ACTTCGTACG GGATATGGTG CAGCAAGGGC ACGAGGTCGC CAACCACACC
TACCACCATG TCCGCCTCAA CGGCCTCGAC GAGGCCAGTG TGACCGCCGA GATCGTCCAG
GCCAACCAGG TGCTTCAGGC CATCACCGGC AAGCCCATCG TCTACTTTCG CCCGCCCGGG
GGTCGCTTCT CACCCACGGT GCTCGAGGTG ATGCGACGGC TAAACATGAC GGTGGTCTTC
TGGACGGACG ATCCAGGCGA CTTCGACAAC ATCGGGCAGG GCCCCCTCGA GGCCCGGTTG
CTGCGGCGGC TGCGCCCCGG TGGTATCGTG CTGTTGCACG ACAACGTGCT CCAGACCATC
GCGGTGCTGC CGCGCTTTCT GGCTTTGGCA GGACAGCAGG GCTACCGGCT GGGCACGGTG
GGTGGGCTGG TGCAGGGGGT GGATCGGAGG TAG
 
Protein sequence
MKSWKGPQLF QTPFICWAML EGMRPWVCLL PWALGLVLAQ PSSPTPLPPV QAIPPGEMQP 
LAPGQRPAPT LPQIVLNPPI RFVERIAWAS NGFVEAAEAL VLIPEASTTP SFMLTKAQRV
VAETFAARPS LSYVDVSIYS RREYAGFGGP LPRFTASVSR ARLNEFLRLN LSNFLQFDHL
WIKPQDAFYG PPAPVTDELE LTPQFQGTRA QLRAQQLEQT VASQQGGVVG NRLFHGDPRQ
RVVALTFDDA PHPLFEPLLL DTLRRAGVRA TFFCIGRNAE AYPYFVRDMV QQGHEVANHT
YHHVRLNGLD EASVTAEIVQ ANQVLQAITG KPIVYFRPPG GRFSPTVLEV MRRLNMTVVF
WTDDPGDFDN IGQGPLEARL LRRLRPGGIV LLHDNVLQTI AVLPRFLALA GQQGYRLGTV
GGLVQGVDRR