Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0979 |
Symbol | |
ID | 8879067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 967463 |
End bp | 969196 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) |
Protein accession | YP_003506764 |
Protein GI | 291295366 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTCA GTCGCTACTA CGATGTGAAG CGTGATGAGC GAGGCAAGCG CTATCTGGAG CCTTTTATCG AGGGTTCGCT CTTGCTGGGG CTGCCCCTGC TGAACAAGGG CACCGCCTTC ACCCACGAAG AGCGCAGAGC CCTCAAGCTC GAGGGCCTCC TGCCGCCGCA CGTGACCAGC CTCGAGGAGC AAAAGCAGCG CAACTACCGG CGCTACCGCC TGATCGAAAA CGACCTGGAA AAGCACATCT TCTTGCGCAA CCTGCAAGAC CGCAACGAGG TGCTGTTCTA CGCGCTGTTT GTAGACCACA TGAGCGAGAT GCTGCCCATT CTGTACACGC CCACGGTGGG CGAGGCGGTT AAGCAGTTCT CGCACATCTA CCGTTACCCG CGGGGCTTTA CGGCCTCCAC CGACAACATC CACGAGATCG ATCAGGCTCT GGCCAACGTG CCCCTCAACG ACGTGCGCCT GGCCGTGGCC ACCGATTCCT CGGCCATTCT GGGCATTGGC GACCAGGGCT TTGGGGGCAT GGCCATCGCC ATCGGCAAGC TTTCGATCTA CACCGCGGCG GGCGGCCTGG GGCCCGACAA GGCCCTGCCC ATCGAGCTGG ACGTGGGCAC CAACCGCGCC GATCTCATCA ACGACCCGCT CTACCTGGGG GTGCGGCACC GCCGGCTCTC GGGCGAGGAG TACTACGCCT TTATGGATCG TTTTGTGGAG GCTTTCTGCA AGCGCTACCC CAACGCGGTC ATGCAGTGGG AGGACTTCGG CAAGGACACG GCTTTTACCG TGCTCGAGCG CTACCGCAAG GTGCTCCCTT CCTTCAACGA CGACATCCAG GGCACCGGCG CAGTTACGCT GGCCGGGGTG CTCTCGGCCT GCCGGATCAA GGGCCAGAAC CTTTCTGACC AGCGCATCCT GGTCTATGGG GCTGGGGCCG GGGGCATTGG GGTGGCCCAG GCCCTGCTCG ACGGCCTGAT GCGCGAGGGT CTGACCGAGG CCGAGGCCCT GGAACGCCTG TTTGTGCTGG ATTCCAAGGG CCTGCTGCTC AGCAACCGCA GCATGGAAGC CTACAAGCAG AAGTTCGCCA AAGACCCAGC CCTGATCAAG GACTGGCGCA TCGCCGGGGA GGCCCCCAAC CTGTACGAAA CGGTGGTGAA TGGCCGGATT ACGGTTTTGC TGGGGCTGTC GGGCCAGGCA GGTTCGTTTA CCGAGCCCGT CGTCCAGGCG ATGCAGGCCA ACACCGAGCA GCCCATTATC TTCCCCCTTT CCAACCCCAC CAGCTCGTCG GAGGCCATCC CCGAGGAAAT CCTGCGCTGG ACGGGCGGCA AAGCTCTAGT GGCCGCGGGG AGTCCCTTTG CGCCGGTGGA GCTGGATGGC CGGGTTTACC CAATCGGCCA GGGGAACAAT GCCTTTGTGT TTCCGGGCCT GGGCTTTGGT ACGGTGCTCT CCAAAGCCAA AGAAGTCTCC GATGGTATGG TGCTCGAGGC GGCCTACGCC CTCTACGACT ACACCCGCCA GCACCACCCC GACCGCATAT ACCCCCCCAC CTCGGAACTG CGCGAGGTCA GCCAGTTGGT GGCCTCGAGG GTGATCCGCC AGGCCATGAA GGAGGGGCTG GCCCGCGAGG AGCGCTTGAA GGGGCTGGGT ATGGAGGCCA TCCAGGCCTA TGTGGCCGAG CGCTTCTGGC AGCCCCGCTA TCTGCCTTAT AAGCCCGCCG CCCACAACAG ATAA
|
Protein sequence | MTVSRYYDVK RDERGKRYLE PFIEGSLLLG LPLLNKGTAF THEERRALKL EGLLPPHVTS LEEQKQRNYR RYRLIENDLE KHIFLRNLQD RNEVLFYALF VDHMSEMLPI LYTPTVGEAV KQFSHIYRYP RGFTASTDNI HEIDQALANV PLNDVRLAVA TDSSAILGIG DQGFGGMAIA IGKLSIYTAA GGLGPDKALP IELDVGTNRA DLINDPLYLG VRHRRLSGEE YYAFMDRFVE AFCKRYPNAV MQWEDFGKDT AFTVLERYRK VLPSFNDDIQ GTGAVTLAGV LSACRIKGQN LSDQRILVYG AGAGGIGVAQ ALLDGLMREG LTEAEALERL FVLDSKGLLL SNRSMEAYKQ KFAKDPALIK DWRIAGEAPN LYETVVNGRI TVLLGLSGQA GSFTEPVVQA MQANTEQPII FPLSNPTSSS EAIPEEILRW TGGKALVAAG SPFAPVELDG RVYPIGQGNN AFVFPGLGFG TVLSKAKEVS DGMVLEAAYA LYDYTRQHHP DRIYPPTSEL REVSQLVASR VIRQAMKEGL AREERLKGLG MEAIQAYVAE RFWQPRYLPY KPAAHNR
|
| |