| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0527 |
|---|
| Symbol | |
|---|
| ID | 8878604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 508063 |
|---|
| End bp | 508530 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_003506322 |
|---|
| Protein GI | 291294924 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.193488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGAC TGCTAGCCCT GTTGGTTCTG GCCTCGTGCT CGTGGGGGCT GGCTTGCGGT
CGCATCCCCC CTGACCTGGC GGGGTGGGCG GCCTACTACG CCAGGGGGTA CGGGCTGGAC
CCGGATTTGC TCGTCGCCCT GGTGTGGGTG GAGAGCCGCT TCTGCCCGGA TGCGGTCTCT
CCCGACGGGG CGGTGGGGCT GGGGCAGATT ATGCCCGCGA CGGGCAGGGC GATTGGCATC
TCGAGGGAGC GGCTTTCGCA CCCCCAGTGG AACCTGTGGG GAGCGGCGCG GCACCTGCGG
CAGCTATGGG ACAGCTTCCG GGACTGGCGG CTGGCGCTGG CGGCCTACAA CGCCGGGTCG
GGGGCGGTGC GTAGGTACAG GGGCATTCCT CCCTACCCCG AGACGCAGAA GTATGTGAGG
GACGTGCTAT GGGTGTACCG GTGGTTGAAG CAGAACAGAA AAGCCTAG
|
|---|
| Protein sequence | MARLLALLVL ASCSWGLACG RIPPDLAGWA AYYARGYGLD PDLLVALVWV ESRFCPDAVS
PDGAVGLGQI MPATGRAIGI SRERLSHPQW NLWGAARHLR QLWDSFRDWR LALAAYNAGS
GAVRRYRGIP PYPETQKYVR DVLWVYRWLK QNRKA
|
|---|
| |