Gene Mrub_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0501 
Symbol 
ID8878578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp487279 
End bp489222 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003506296 
Protein GI291294898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000301954 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0595539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGA GTATACCACC CGTACATCAA GACTTTATAA GCCCGGTAGA GCTTGAGGAG 
GTTCTGCCCG GCCATCCCCG CTACCGCATC CAGCAAGGGC GCATTGAGAT GGCCCGGCTG
GAAGGGCGGG GTGAGCATCG GACTGTTGTC TACGTGCCGC TTTGCAACTT TGCCTGTCGC
ATCCGGCGGG AGGTGCGCTA CACGGATGGG GTGCAGGACG AGCTGCTGTT CGAGCTCGAG
GGCTCCACCG CAGCCGGCCC CCTTCCGTCC GCCCGGGTGC GCTCGAGCGA GTTTGCTGCG
ATGCACTGGC CGGTGCGGGA GTGGGGGGCC CGGGCCATCG TGACGCCGGG ACATGGGGTC
AAAGACCATC TTCGCGCCGC CATCCAACAC CTGAGCACCC CTGAGCAGGC CACGGTCTAC
GCCCACACCG GCTGGGTTCG GCAGGGCGGG GATTGGGTGT ACCTGCACGC CGGGGGCGGC
ATCGGGCCGG AGGGCAGCGT GGAGGGCCTC GAGGTGGATC TCCCCCCCGA ACTGAGCGGC
TTCGCCCTGC CCCAACCGCC CACCGGCGAG GCCGAACCGG AGGCGCACCG GCGGCTGCTG
GCAATGCTGG AGGCAGGCCC CCGGCGGGTC ACCTGGCCCC TTTTGCTCTA TGCCCTGGGA
GCACCCATCA ACCACCCGCT GGGCAGCCTG TACGTTGCCG GGCTGACCGG GGCCCGCAAG
ACCAGCCTGG CCCTGCTGGT GCAGGCGTTG TGGGGGCACA CTGCCCCGCA CCCGCCGACG
AACTGGGAGG GCACGGCGAA CGCCCTGGAG GCCCTGGCCT TCGCGGCCAA GGATGCCCTG
CTGCTGATTG ACGACTACGC CCCCACCGGA CATGAGGGCA AGCAGAAGGA GCTCCAGGGT
AAGGCCGCCC GGATTCTGCG CAACCAGGGC AACGCCACGG GGCGGGCGCG GATGCGCTCG
GACGGACGGA TGCAGCCCGA CCGGGCCCCC CGGGGCAGCC TGCTGGTCAC CGGCGAGGAT
CTGCCCCCCG GCCACAGCGT GCGGGCGCGG TGCCTGATCC TCGAGCTAAC CCCGGGCGAG
GTGAACCTGG AGGCGCTCAC CCGGCTGCAA AACCAGGCGG CGGGGTTTCC CCTGGCCCTG
GCCGCCTGGG TGCGCTGGCT GGCCGGGCGG CTGGAGGGGG TGCGGCAGCA GGTGCGGCTT
CGCACCGGCG AGCTGCGCTC ATGCTATCCA GCCGCCCACG GACGCACCAC CGACGCCCTG
GCCCGGCTTC AGGCAGTGTG GGAGATCGTG CGGGCTTACT GGCTCGAGGT GGGGGTCATC
TCCCCGGCGG AGGCGGAGCG GTTCACGCGG GAGGTGGAGG CCGTCCTGCA TGAGGTGGGG
GAGGCGCAGC AGGGCTACCA GAGCGACATG AACCCGGTGG AGCGCTTCAT CCCGCTGGTG
CTGGGGCTCC TGAGCAGCGG GCGGGCCCAC CTGGGCAACC GCCATGACGC CCAGACCCCC
CCTGCCGAAC CCGAGCGGTG GGGCTGGCAG GCCCGGGCGG ACGGGTGGGT GCCCCAGGGG
CCGCTGGTGG GCTGGGTGGA TGCCCAGGGC ATATACCTGG AACCCACCGC CGCCTACGCC
GCGCTGAACC GCCTGGCGGC GGAGAGCGGG GAGCCGCTCC CTACCCCCCG CACCCTGTGG
AAGCGGTTGG GCGAGCGGGG GGTGATCCGC TCGCAACAGC GGGGTGGGCG GGTGCGCTAC
GGGGTGGGGG TGCGGATTCA GGGCACGACC CGTGACGTGG TGCAAATTCC AGGGGGTGTC
CTCGCCAAAA CTCCCAACAG TCCCAACATG GGGCAAAATA CTGTCCTGGA CGACACAAAA
GACGTTGGGA GAAAACCGGC TGTTGGGAGT TCAGTTTGTC CCAACGGCGA GGGGGAGGTG
GGGGCGTATG AGGTGGAACT CTAG
 
Protein sequence
MVKSIPPVHQ DFISPVELEE VLPGHPRYRI QQGRIEMARL EGRGEHRTVV YVPLCNFACR 
IRREVRYTDG VQDELLFELE GSTAAGPLPS ARVRSSEFAA MHWPVREWGA RAIVTPGHGV
KDHLRAAIQH LSTPEQATVY AHTGWVRQGG DWVYLHAGGG IGPEGSVEGL EVDLPPELSG
FALPQPPTGE AEPEAHRRLL AMLEAGPRRV TWPLLLYALG APINHPLGSL YVAGLTGARK
TSLALLVQAL WGHTAPHPPT NWEGTANALE ALAFAAKDAL LLIDDYAPTG HEGKQKELQG
KAARILRNQG NATGRARMRS DGRMQPDRAP RGSLLVTGED LPPGHSVRAR CLILELTPGE
VNLEALTRLQ NQAAGFPLAL AAWVRWLAGR LEGVRQQVRL RTGELRSCYP AAHGRTTDAL
ARLQAVWEIV RAYWLEVGVI SPAEAERFTR EVEAVLHEVG EAQQGYQSDM NPVERFIPLV
LGLLSSGRAH LGNRHDAQTP PAEPERWGWQ ARADGWVPQG PLVGWVDAQG IYLEPTAAYA
ALNRLAAESG EPLPTPRTLW KRLGERGVIR SQQRGGRVRY GVGVRIQGTT RDVVQIPGGV
LAKTPNSPNM GQNTVLDDTK DVGRKPAVGS SVCPNGEGEV GAYEVEL