Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0417 |
Symbol | |
ID | 8878490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 394865 |
End bp | 395422 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | Tripartite ATP-independent periplasmic transporter DctQ component |
Protein accession | YP_003506214 |
Protein GI | 291294816 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000370406 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGGCGT TGCTTTTAAT AGCCCGGCTG ATAGATGGGC TCAACGAATG GGTGGGGCGT GTGACCCTGT GGCTGGTGGT ACCGATGATC GCTATTGGGG CCTACAACGC CATTGGGCGC AGCCTGGATA AGAGCCTGGG AACCCGCCTG GCCTCCAACA CTTACTTTGA GCTGCAGTGG TATCTTTTTT CCCTGATTTT TCTTCTGATG GTAGGGTATG TGCTCAAACA CAACGGCCAT ATCCGGGTGG ATGTGATCTA TGCCCGCCTG GACGACCGAG GCCGGGCCTG GGTCAATATG CTCGGATCTA TTTTGTTCGT GGTGCCTTTT GCCGTGCTGC TCTTTTATGT CTCTTTGCCA CTGGTGGCCT TCTCGATACA GGTACGGGAA GTCTCCTTAG ACGCGGGTGG GCTGCCCCGC TGGCCCCTCA AGCTGATGCT GCTTCCAGCC TTTGTACTGC TGGCCCTGCA GGGCCTATCA GAGTTCATTA AGAACCTGGC GTACCTGCGT GGGGCCTTGC CCAGGCCGCC CTATGAGGCT GAAGGGGAGG TGGCCTAG
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Protein sequence | MKALLLIARL IDGLNEWVGR VTLWLVVPMI AIGAYNAIGR SLDKSLGTRL ASNTYFELQW YLFSLIFLLM VGYVLKHNGH IRVDVIYARL DDRGRAWVNM LGSILFVVPF AVLLFYVSLP LVAFSIQVRE VSLDAGGLPR WPLKLMLLPA FVLLALQGLS EFIKNLAYLR GALPRPPYEA EGEVA
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