Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_6292 |
Symbol | |
ID | 6142429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010510 |
Strand | - |
Start bp | 577088 |
End bp | 578812 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641640337 |
Product | type I secretion system ATPase |
Protein accession | YP_001767016 |
Protein GI | 170745559 |
COG category | [R] General function prediction only |
COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG AACGCGTGTT GCGTGTCGCG AGGCGCCGGG AGTTCTGGTC CGCGGTTCGG GCCGGACGCA CGTGCCTGAT CACCGTGATG ATCATCAGCG GTCTCATCAA CCTGCTGATG CTCACGGCCC CGATCTTCAT GCTGCAGGTC TACGACCGGG TGCTGCCGAG CCGGAGCATC GCGACGCTCG TCGGTCTCGC CGGCATCACG CTGATGCTGC TCGTGATCCA GAGCATCTTC GAGATCTTCC GGGCCCGCAT CCTGGCGCGC TTCGGTCGCC TCGTCGACGA GCGCCTGGGG CCGCGGATCT TCCGGGCCCT GCTGGCCCGC GGCGCCGAGA TGCCGCGCGG CGACGACGGA CCCCAGGCCC TGCGCGATCT CGATACCGTC CGCGGCTTCG TGTCGAGCAT GGCGGTCAGC GCCTTCTTCG ACCTGCCCTG GGTGCCGCTC TACGTCGCGG TCTGCTTCCT GTTCCATCCC TGGCTCGGCG CGGCGGTGGC CGGGGGCGCC CTGTTCCTGT GCGTGCTGAC GGTCCTCACG GACTGGGCCT CGTCCGCCTC CACTCAGGAA GCCGTCCGGA CGGCCGGTGA GCGCCGGTCC TTCACCGACA TGGCGCACCG GACGGCACCG CTGCTCTCGG CCCTCGGAAT GCGGTCCCGC ATGGCGGAAC TCTGGCAGGT CCGGGCCCGG CGGAACCTCG ACGTCGCGGC GTACGGAAAC GATCTGGCCA TCGGCTTCGG CACGACGGCA CGCCTGCTGC GCACGGTGCT GCAATCCAGC ATCCTCGGTC TGGGAGCCTT CCTGGTGGTG CGCGAGGAGG CGACGGCCGG CGTGATGCTG GCCGCCACGA TCCTGTCCGC CCGCGCCCTC GCGCCGGTCG ACCTGGCGAT CGCCAACTGG AAGTCGTTCT CGGGCGCCCG ACAGGCCTGG GGCCGCCTCG TCGCGTTCCT GCCCCGGCGG GAGCCCGCCG CCCTCACGCC GCTCCCGGCG CCGCGGGAGA GCGTCCGCGT GACGGCCCTG TCGATCGCGG CGCCCGGAAC CGACACCCTG GTGCTCCACG ACGTCAACGT CGCCCTCGCC CCCGGCAGCG CCCTCGGCGT GATCGGGGCC AGCGGCTCCG GCAAGTCCAC CTTCGCCCGT GCCCTCGTCG GGCTGGCGCG CCCGAGTCGC GGCGTGATCC GCCTCGACGG CGCGTCGATC GATCAGTGGG ACTCCGATGC CCTCGGGCGC GCGGTCGGCT ACCTGCCGCA GGACATCGAG ATGTTCGACG GCACGATCGC CGAGAACATC ACGCGCTTCG ATCCCGAGCC CAACCCCGAG GCCCTGCTCG CGGCCGCCCA GGCCGCCGGC GTGCACGAGG TCGTGCTCCG CCTGCCGGGC GGCTACGATG CCCGCGTCGG TTCTGGCGGC CTGGGCCTCT CCGGCGGTCA GCGGCAGCGG ATCGCGCTCG CGCGGGCGCT CTACGGCGAT CCCTTCCTCG TGGTCCTCGA CGAGCCGAAC TCGAATCTCG ACGTCGACGG CGACCGCGCC CTGTCGGCCG CCGTGCAGGG CGTGCGCGCC CGCGGCGGCA TCGTGGTGGT GATCGCCCAC CGGCCCAGTG CCCTGGCGGC GGTCGATCGC ATCCTGGTCC TGGGGGAGGG GCGCGTGCAG CTGCACGGTC CGCGCGACGA CGTTCTGTCG AAGCTCAATG CCCTGACGCG ACGGACGCCC ACGAGGGTTG CATGA
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Protein sequence | MTDERVLRVA RRREFWSAVR AGRTCLITVM IISGLINLLM LTAPIFMLQV YDRVLPSRSI ATLVGLAGIT LMLLVIQSIF EIFRARILAR FGRLVDERLG PRIFRALLAR GAEMPRGDDG PQALRDLDTV RGFVSSMAVS AFFDLPWVPL YVAVCFLFHP WLGAAVAGGA LFLCVLTVLT DWASSASTQE AVRTAGERRS FTDMAHRTAP LLSALGMRSR MAELWQVRAR RNLDVAAYGN DLAIGFGTTA RLLRTVLQSS ILGLGAFLVV REEATAGVML AATILSARAL APVDLAIANW KSFSGARQAW GRLVAFLPRR EPAALTPLPA PRESVRVTAL SIAAPGTDTL VLHDVNVALA PGSALGVIGA SGSGKSTFAR ALVGLARPSR GVIRLDGASI DQWDSDALGR AVGYLPQDIE MFDGTIAENI TRFDPEPNPE ALLAAAQAAG VHEVVLRLPG GYDARVGSGG LGLSGGQRQR IALARALYGD PFLVVLDEPN SNLDVDGDRA LSAAVQGVRA RGGIVVVIAH RPSALAAVDR ILVLGEGRVQ LHGPRDDVLS KLNALTRRTP TRVA
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