| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_6171 |
|---|
| Symbol | |
|---|
| ID | 6142310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010510 |
|---|
| Strand | - |
|---|
| Start bp | 441739 |
|---|
| End bp | 444708 |
|---|
| Gene Length | 2970 bp |
|---|
| Protein Length | 989 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641640214 |
|---|
| Product | formate dehydrogenase, alpha subunit |
|---|
| Protein accession | YP_001766897 |
|---|
| Protein GI | 170745440 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.796652 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG CCCCCGAACA GCGCGGCGAC GAGACCGAGA AGCCCGAGAT CCGGGCCGAC
GGGCTGCAGG ATGCGGGCGG GCCCGCGTCG GGCCCGAAGC CGGGGGCCGG CGGCTCCTAC
TCGGAAGGGG CGAAGGCGGG CGGCCAAGCG GCCCCTGAGC CGTCGGGCCT GCACGATCTG
AAGGGGCGGC CGACCGCCCC CCCGACCATC GCGTTCGAGC TCGACGGACA GCAGGTCGAG
GCCGCCCCCG GCGAGACGAT CTGGGCCGTC GCCAAGCGCC TCGGCACCCA CATCCCGCAC
CTCTGCCACA AGCCCGAGCC CGGCTACCGC CCGGACGGCA ACTGCCGCGC CTGCATGGTC
GAGATCGAGG GCGAGCGCGT GCTGGCCGCC TCGTGCAAGC GCACGCCGGC CGTCGGCATG
AAGGTCAAGT CCGCGACCGA GCGCGCCACC AAGGCCCGCG CCATGGTGCT CGAGCTGCTC
GTGGCCGACC AGCCCGAGCG CGCGACCTCG CACGACCCGA CCTCGCATTT CTGGGTGCAG
GCCGACTTCC TCGACGTGTC CGAGAGCCGC TTCCCCGCGG CCGAGCGCTG GACCGGCGAC
TTCAGCCACC CGGCCATGAG CGTCAATCTC GACGCCTGCA TCCAGTGCAA CCTCTGCGTC
CGAGCCTGCC GCGAGGTCCA GGTCAACGAC GTCATCGGCA TGGCCTACCG CTCGGCCGGC
GCCAAGGTCG TGTTCGACTT CGACGACCCG ATGGGCGGCT CGACCTGCGT GGCCTGCGGC
GAGTGCGTCC AGGCCTGCCC GACCGGCGCG CTGATGCCGT CCGCCTACCT CGACGCCGAG
CACAAGACCC GGACGGTCTA CCCCGACCGC GAGGTGACCT CGCTGTGCCC CTATTGCGGC
GTCGGCTGCC AAGTCTCCTA CAAGGTGAAG GACGAGAAGA TCGTCTACGC CGAGGGCGTG
AACGGTCCGG CCAACCACAA CCGGCTCTGC GTGAAGGGGC GCTTCGGCTT CGATTACGTC
CACCACCCCC ACCGCCTGAC GGCGCCGCTG ATCCGCCTGG ACAACGTCCC GAAGGACGCC
AACGATCAGG TCGACCCGGC CAACCCGTGG ACGCACTTCC GCGAGGCGAC CTGGGAGGAG
GCGCTCGACC GCGCCGCTGG GGGCCTCAAG ACGGTCCGCG ACACGCACGG CCGCAAGGCG
CTCGCCGGCT TCGGCTCGGC GAAGGGCTCG AACGAGGAGG CCTACCTCTT CCAGAAGCTG
GTGCGGCTCG GGTTCGGCTC GAACAACGTC GACCACTGCA CCCGGCTGTG CCACGCCTCG
TCGGTGGCGG CCCTCATGGA AGGCCTGAAC TCGGGCGCCG TGTCGGCGCC GTTCTCGGCG
GCGCTCGACG CCGAGGTCAT CATCGTGATC GGCGCCAACC CGACCGTGAA CCACCCGGTG
GCGGCGACCT TCCTCAAGAA CGCCGTGAAG CAGCGCGGCG CCAAGCTGAT CGTCATGGAC
CCGCGCCGGC AGGTGCTGTC GCGGCACGCC TACAAGCACC TCGCGTTCAA GCCCGGCTCG
GACGTGGCGA TGCTCAACGC GATGCTCAAC GTGATCATCG AGGAGGAGCT CTACGACGAG
CAGTACATCG CGGGGTACAC GGAGAACTTC GAGGCGCTGA AGGAGAAGAT CGTCGAGTTC
ACGCCGGAGA AGATGGCCTC GGTCTGCGGC ATCGACGCGG AGACGCTGCG CGAGGTCGCC
CGGCTCTACG CCCGCGCCAA GTCCTCGATC ATCTTCTGGG GCATGGGCAT CAGCCAGCAC
GTCCACGGCA CCGACAACTC GCGCTGCCTG ATCGCGCTCG CCCTCGTCAC GGGTCAGATC
GGGCGCCCCG GCACCGGCCT GCATCCGCTG CGCGGCCAGA ACAACGTCCA GGGCGCGTCC
GACGCCGGCC TGATCCCGAT GGTCTACCCG GACTACCAGT CGGTCGAGAA GGCCGCGGTG
CGGGAGATGT TCGAGGAGTT CTGGGGTCAG AAGCTCGACC CGCAGAGGGG CCTCACCGTC
GTCGAGATCA TGCGGGCGAT CCACGCCGGC GAGATCAAGG GCATGTTCGT CGAGGGCGAG
AACCCGGCGA TGTCCGACCC CGACCTGAAC CACGCCCGGC ACGCCCTGGC GATGCTCGAC
CACCTCGTCG TGCAGGACCT GTTCCTGACG GAGACCGCCT TCCACGCCGA CGTGGTGCTG
CCGGCCTCCG CCTTCGCCGA GAAGGCCGGC ACCTTCACCA ACACCGACCG TCGCGTGCAG
ATCTCGCAGC CGGTGGTGTC CCCGCCGGGC GACGCGCGGC AGGATTGGTG GATCATCCAG
GAACTGGGGA AGCGCCTCGG CCTGCCCTGG AACTACGGCG GTCCGGCCGA CATCTTCCGC
GAGATGGCCA TGGTGATGCC GTCGTTCAAC AATATCACCT GGGAGCGCCT GGAGCGCGAG
GGCGCCGTGA CCTACCCGGT CGACGCGCCG GACAAGCCCG GCAACGAGAT CATCTTCTAC
GCCGGCTTCC CCACGGAGAG CGGGCGCGCG AAGATCGTTC CGGCCGCCGT GGTGCCGCCG
GACGAGCTGC CGGACGACGA CTACCCGATG GTCCTGTCGA CCGGCCGCGT GCTCGAACAC
TGGCACACCG GATCGATGAC CCGGCGCGCC GGCGTCCTCG ACGCGCTGGA GCCCGAGGCG
GTCGCCTTCA TGGCCCCGAA GGAGCTCTAC CGGCTCGGGC TGGAGCCCGG CGACACGATG
AAGCTGGAGA CGCGCCGCGG CGCCGTCCAC CTGAAGGTGC GCTCCGACCG CGACGTGCCG
GTCGGCATGA TCTTCATGCC GTTCTGCTAC GCCGAGGCCG CGGCCAACCT GCTGACGAAC
CCGGCGCTCG ACCCGATGGG CAAGATCCCC GAGTTCAAGT TCTGCGCGGC CCGGGCCTCC
GCCGTCCACA CGGCCATGGC CGCCGAGTAG
|
|---|
| Protein sequence | MSNAPEQRGD ETEKPEIRAD GLQDAGGPAS GPKPGAGGSY SEGAKAGGQA APEPSGLHDL
KGRPTAPPTI AFELDGQQVE AAPGETIWAV AKRLGTHIPH LCHKPEPGYR PDGNCRACMV
EIEGERVLAA SCKRTPAVGM KVKSATERAT KARAMVLELL VADQPERATS HDPTSHFWVQ
ADFLDVSESR FPAAERWTGD FSHPAMSVNL DACIQCNLCV RACREVQVND VIGMAYRSAG
AKVVFDFDDP MGGSTCVACG ECVQACPTGA LMPSAYLDAE HKTRTVYPDR EVTSLCPYCG
VGCQVSYKVK DEKIVYAEGV NGPANHNRLC VKGRFGFDYV HHPHRLTAPL IRLDNVPKDA
NDQVDPANPW THFREATWEE ALDRAAGGLK TVRDTHGRKA LAGFGSAKGS NEEAYLFQKL
VRLGFGSNNV DHCTRLCHAS SVAALMEGLN SGAVSAPFSA ALDAEVIIVI GANPTVNHPV
AATFLKNAVK QRGAKLIVMD PRRQVLSRHA YKHLAFKPGS DVAMLNAMLN VIIEEELYDE
QYIAGYTENF EALKEKIVEF TPEKMASVCG IDAETLREVA RLYARAKSSI IFWGMGISQH
VHGTDNSRCL IALALVTGQI GRPGTGLHPL RGQNNVQGAS DAGLIPMVYP DYQSVEKAAV
REMFEEFWGQ KLDPQRGLTV VEIMRAIHAG EIKGMFVEGE NPAMSDPDLN HARHALAMLD
HLVVQDLFLT ETAFHADVVL PASAFAEKAG TFTNTDRRVQ ISQPVVSPPG DARQDWWIIQ
ELGKRLGLPW NYGGPADIFR EMAMVMPSFN NITWERLERE GAVTYPVDAP DKPGNEIIFY
AGFPTESGRA KIVPAAVVPP DELPDDDYPM VLSTGRVLEH WHTGSMTRRA GVLDALEPEA
VAFMAPKELY RLGLEPGDTM KLETRRGAVH LKVRSDRDVP VGMIFMPFCY AEAAANLLTN
PALDPMGKIP EFKFCAARAS AVHTAMAAE
|
|---|
| |