Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_5857 |
Symbol | |
ID | 6142027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010510 |
Strand | + |
Start bp | 95826 |
End bp | 97061 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641639912 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001766598 |
Protein GI | 170745141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.101493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.03083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACGG GCTTCGACAG GCGCCGGATG CTCCAGGGCG GCGCCGCCGC ATCCGCGCTG GCGCTCGCCG CCCCGGCGCT CCTGCGCGCC GCGGCCGCGC AGGACGGTCC GATCCGCATC GGCTTCCCGG TACCGCTCAC CGGCGCCTTC GGGGCCGAGG CGAACGATCA GGTCCGCGCC GCCCAGCTCG CCGTCAAGGA GTTCAACGAG TCCGGCGGCT TCCAGGGCCG CAACGCCGAG CTCCTGGTGC GCGACGACAA GCTCAATCCC GGCGAGGCCG CGACCCGGAC CCTCGAGCTG ATCGAGAAGG ACAAGGTCAA TGTCCTGGTC GGTGGCCTGT CGGCGGCGGT GACGCTCTCG ATCAACAACG TCGCCCGCGA GCGGGGCGTG ATCTACAACT CGATCAGCCA GTCCGACGCG ATCAACGAGG CCAAGGATTT CGGCCGCACC ACCTTCCACG AGGCCCTGAA CCCGCACATG ACCGCGGGTG CGGTCGGCCG CTACGTCTTC CCGAAATCGG GCAAGCGGGT CGCCTTCCTC AGCGCCGACT ACGCCTACGG CCACGAGATG ATGCGCGGGT TCAAGCGCGC CGGCGAGGTC TTCGGCATCG AGGTCGTCGC CGACATCCGC CACCCGATCG GCGCCTCCGA CTACTCGGCC TTCCTGCCCC GCATCGCGGC GCTCAAGCCC GACGTGCTCT GCCTGTGCAA TTTCGGCCGA GACCAGGTGG TCTCGATCCA GCAGGCCACC GAGTTCGGCC TGAAGCGCAA GACCAAGCTC GTCGCGCCGG TGCTCCTGTT CACCGCGCGC AAGGCCGGCG GCGACGCCTT CGACGGCGTG ATCGGCGGCA CCTCCTACTA CTGGCGCCTG GAGGACAGCG TGCCCTCCGC CAAGGCGTTC AACGACCGGT TCCGGGCCGC CTACAACGGC GCCGTGCCCT CCGATTACGG GGCGCTGGGC TATGCCGGCG TCCGCTCGGT GCTGGAGGGG GTGAAGGCCG CCGGGTCGGT CGAGACCGAC AAGGTCGTGG CCGCCATGGA GGCCCTGAAG GCCGATTTCT ACAAGGGGCC CCAGAGCTTC CGGAAATGCG ACCACCAGTC GGTGCAGTCG GTCCTGATCG TCGAGGCGAA GTCGAAGGAC ATGAAGACCC CGGACGACGT CTTCACGATC CTCGGCACGG AGGGGCCGGA CGAGCGCTTC CTGCGCGGCT GCGACGAACT CGGCCACAAG GCGTGA
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Protein sequence | MGTGFDRRRM LQGGAAASAL ALAAPALLRA AAAQDGPIRI GFPVPLTGAF GAEANDQVRA AQLAVKEFNE SGGFQGRNAE LLVRDDKLNP GEAATRTLEL IEKDKVNVLV GGLSAAVTLS INNVARERGV IYNSISQSDA INEAKDFGRT TFHEALNPHM TAGAVGRYVF PKSGKRVAFL SADYAYGHEM MRGFKRAGEV FGIEVVADIR HPIGASDYSA FLPRIAALKP DVLCLCNFGR DQVVSIQQAT EFGLKRKTKL VAPVLLFTAR KAGGDAFDGV IGGTSYYWRL EDSVPSAKAF NDRFRAAYNG AVPSDYGALG YAGVRSVLEG VKAAGSVETD KVVAAMEALK ADFYKGPQSF RKCDHQSVQS VLIVEAKSKD MKTPDDVFTI LGTEGPDERF LRGCDELGHK A
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