| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4438 |
|---|
| Symbol | |
|---|
| ID | 6140503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 4719253 |
|---|
| End bp | 4720824 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641630151 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001757087 |
|---|
| Protein GI | 170750827 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGAC GCACCTTCCT CGCCGCCGGG GCCGCGGCCC TGGCGGCCCC GGCCGTCGGG
CGGGCGCAGG GCACCCGGGT CCTGCGCATG GTCCCCCAGG CGAACGTCAC CTCGATCGAT
CCGATCTGGA CGACCGCGAT CGTCACCCGC AACCACGCCT ACGTGATCTA CGACACGCTG
TTCGGCCTCG ACGCCGAGCT GCGGCCGCGG CCGCAGATGG CGGCCGGCCT CAAGGTCGAG
CAGGACGGGC GCCGGGTGAC GATCCCCCTG CGCGCGGGCC TGCGCTTCCA CGACGGCACG
CCGGTCCTGG CGCGGGACTG CGTCGCCAGC ATCCGGCGCT GGGCGGCGCG CAACGGCTTC
GGCCAGACCC TGATGGCCGC CACCGACGAA CTCGCCCACG ACGGCGACAC CGATATCGTG
TTCCGCCTGA AGGCGCCGTT CCCGCTCCTG CCCCAGGCGC TGGCGAGCGT CAGCCAGCCG
GCCTTCGTCA TGCCCGAGCG GATCGCCCAA ACCGATCCGT TCAAGCAGAT CACCGACGCC
ACCGGCTCCG GGCCGTTCCG CTGGAAGGCC GACGAGTTCA ACTCGGGCAG CCTGATGGTC
TACGAGCGCC ACCCCGGTTA CGTGCCGGCG CCCGGGACGC CGAGCCTGAC GGCGGGCGGC
AAGGTCGCCC ATTTCGACCG GATCGAGTGG CGGATCATCG CCGACGGCGC CACCGCGGCG
GCGGCCCTGC AGAACGGCGA GATCGACTGG TACGAGCAGC CGCCGCCCGA GCTCCAGCAG
CTGCTCGCCC GCAACCGCGA CATCGTGGTG GAGGGCCTCG ACCGGCTCAC CAACCCGGCG
ATCCTGCGGA TGAACCACCT GCAGCCGCCC TTCGACGACG TCGCGGTGCG CCGGGCGGTG
CTGCCGGCGA TCGTCCAGAG CGACTTCATG GCGGCGATCG TCGGCGACGA TCCGGCCACC
TACGACGACC GCTGCGGGAT CTTCACGCCG GGCACGCCGA TGGCGAGCCA GGCCGGCCTG
GAGGCGCTGA CCGGGCCGCG CAGCCTGGAG GCGGCCCGGG CGGCGCTCAA GGCCTCGGGC
TACGACGGGG CGAAGATCCG GCTGATCGGC CCCACCGACA TCCTGGCGCC GTCGGCGCTG
ACCCAGGTCG CGGCCGACCT GCTCCCCCGG ATCGGCTTCA ACGTCGACCT GGCCCTGAGC
GACTGGGGCA CGGTGATCCA GCGGCGCGTC TCGCGCGAGC CCGTCGAGAA GGGCGGCTGG
TCGGTGCTGC TCACGACCTT CTCGTCCTTC GACAACGCCG ACCCCGCCGC CCTCCAGCCG
CTCCGGGCCA ACGGGCCGAA CGCGTGGTTC GGCTGGCCGT CGGTGCCGCG GCTGGAGGCG
CTGCGGACCG CGTGGTTCGC GGCCTCTGAC GCGGAGGCGC GCCGGGCGAT CTGCGCCGAC
ATGCAGCGGA TCGCCCTCGA GGAGGTCGTG TTCGTGCCGG TCGGCTCCTA CCGCTCGATG
ACGTCCTACC GGCGCGACCT GACGGGCCGC CTCCCGGGCT TCCCGATCCT CTGGAACCTC
CGGCGCGCCT GA
|
|---|
| Protein sequence | MRRRTFLAAG AAALAAPAVG RAQGTRVLRM VPQANVTSID PIWTTAIVTR NHAYVIYDTL
FGLDAELRPR PQMAAGLKVE QDGRRVTIPL RAGLRFHDGT PVLARDCVAS IRRWAARNGF
GQTLMAATDE LAHDGDTDIV FRLKAPFPLL PQALASVSQP AFVMPERIAQ TDPFKQITDA
TGSGPFRWKA DEFNSGSLMV YERHPGYVPA PGTPSLTAGG KVAHFDRIEW RIIADGATAA
AALQNGEIDW YEQPPPELQQ LLARNRDIVV EGLDRLTNPA ILRMNHLQPP FDDVAVRRAV
LPAIVQSDFM AAIVGDDPAT YDDRCGIFTP GTPMASQAGL EALTGPRSLE AARAALKASG
YDGAKIRLIG PTDILAPSAL TQVAADLLPR IGFNVDLALS DWGTVIQRRV SREPVEKGGW
SVLLTTFSSF DNADPAALQP LRANGPNAWF GWPSVPRLEA LRTAWFAASD AEARRAICAD
MQRIALEEVV FVPVGSYRSM TSYRRDLTGR LPGFPILWNL RRA
|
|---|
| |