Gene Mrad2831_4026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_4026 
Symbol 
ID6140083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4270216 
End bp4270812 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content72% 
IMG OID641629737 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001756681 
Protein GI170750421 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.108875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.868186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA TGCTGCAAGC CGCTCCCGCG GGGAGCGGGT CCGGTCCGGT GCCCCGGGGC 
GCCGACGCCG AGATGCGCGA CCTCCTGCTG GGAGCGATCC CGGCGCTGCG GGCCTTCGCG
TTCTCGCTGA CCTACGACCT CGACCGCTCG GACGATCTCG TGCAGGACAC GCTCGTGCGC
GCCTGGGTCA ACGCCGCCAG CTTCCGCCGC GGGACCAACC TGACCGCGTG GCTGTTCACG
ATCCTGCGGA ACCTGTTCTA CTCGGAGCAG CGCAAGCGCA AGCGCGAGGT CGAGGATGCC
GACGGCGTCC ATGCCGGGCG CCTGACCGCC CTCCCCGAGC AGGAGATCCG GATGGAGATG
GCGCAGTTCC AGAGCGCGCT GAACCAGCTG CCGCCGGCCC AGCGCGAGGC GCTGGTCCTG
GTCGGCGCCC AGAGCTTCAC CTACGAGGAG GCCGCGGCCA TCTGCGGCGT GGCGGTGGGC
ACGATCAAGA GCCGGGTCAG CCGCGCCCGG ACCCGCCTGA TCGAGGTGCT GGGCATGACC
GGCACCGACG ATATCGGGCC CGACCCGCAG ACCCGCGCGG CCCTCGACGG CCCCTGA
 
Protein sequence
MTLMLQAAPA GSGSGPVPRG ADAEMRDLLL GAIPALRAFA FSLTYDLDRS DDLVQDTLVR 
AWVNAASFRR GTNLTAWLFT ILRNLFYSEQ RKRKREVEDA DGVHAGRLTA LPEQEIRMEM
AQFQSALNQL PPAQREALVL VGAQSFTYEE AAAICGVAVG TIKSRVSRAR TRLIEVLGMT
GTDDIGPDPQ TRAALDGP