| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3611 |
|---|
| Symbol | |
|---|
| ID | 6139664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 3835952 |
|---|
| End bp | 3838396 |
|---|
| Gene Length | 2445 bp |
|---|
| Protein Length | 814 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641629322 |
|---|
| Product | 1A family penicillin-binding protein |
|---|
| Protein accession | YP_001756270 |
|---|
| Protein GI | 170750010 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.246117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00429634 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCG ACGCGCCGGA ACGCGCCCCG GCCGACGGGC CGAAACCGCC GAAGCCGGAT
CCCGCCGCCG ACGCTCCGGA CCCGCGGCTC GCCGCCCGGG AGGCCGGGCG CGCCGCGCGC
GACCTCGCGC GCCATCTCCG GACCCTCCTC GCCGCGGCCG GACTCGGCCT CGCGCGGACC
GGCCGGGCCC TGTCGGCCCG CGCGGCGGAG CGCGCGGCGC GAGCGCGGGC CGATCTCCCG
CCCGCCGCCG AGACGGGCGC GCGCGTCCGG ACTCGGCGAT TTCGCCCGAT CCTCGGCCGC
CGGCACCCGG CCGTGATCGC CGCCGCCCTG GTGGTCCTGC TGCCGGCGCT GGCGCTGGCG
ATCTACCTGT TCGCGGCCTT CGTGAGCCTG CCGCCGCTGG GCGGCGCCGT GGTCGAGACC
GGCCAGCGGG CGATCACCGT CGAGGCCGAC GACGGCCGGG TCTTCGCCAC ACGCGGCAGC
TTCCGGGGCC AGAAGCTCAC CGCGGCCGAC CTGCCGCCGC ACCTCGCCCA GGCGATCGTG
GCGATCGAGG ACCGCCGCTT CTACAGTCAC TGGGGCATCG ACCTGCGCGG CCTCGCCCGG
GCGACGTGGC GCAATCTCCG CGGCGGCGGC GTGCGCGAGG GCGGCTCGAC CATCACCCAG
CAATACGTTC GCCTGACCTC CCTCAACCAG GAGAAGACGC TCTGGCGGAA GGTGCAGGAG
GCCTTCCTGG CGCTGCGGGT CGAATCGACG ATGAGCAAGG ACGCGATCCT GCTCGGCTAC
CTCGACTCCG CCTATTTCGG CGCCGGCGCC TACGGGGCGG ACGCGGCGGC GCGGCGCTAC
TTCGGCAAGC CCGCCAAGGC GCTGAACCTG CCGGAATCGG CGATGCTGGC CGGGCTGGTG
CGGGCGCCCT CGCAGCTCGC CCCGACCCGC AACCTCGGCG GCGCCAAGGA GCGCGCCGAC
GTGGTGCTCC AGGCCATGGT CGAGACCGGC GCGATCACGC AAGGAGAGGC CGATGCCGCG
CGCAAGCAGA GCGTGACCCT CAAGTCGCCC CCCGAGGCGC CGCCCGGCAC CAACTACTTC
CTCGACATGA TCGCGGGCGA CGTGAAGCGC CTCGCCGGCA CGGACGGCGA CATGACGGTG
CGCTCGACCC TCAACCTCGA CCTGCAGAGC CTCGCCGAGG GCGTCGTGGC CCGCCGCCTC
GACAAGGACG GCGCCCGCCG CAAGGTCGGC CAGGCCGCCA TGGTGGTGCT CTCGAAGGAG
GGCGCGATCC TCGCCATGGT CGGCGGCCGC GACTACGAGG ACAGCCAGTT CAACCGCGCC
GTCCAGGCCA AGCGCCAGCC CGGCTCCCTG TTCAAGCTCC TCGCCTACCT GACGGCCTAC
GAGAAGGGCT ACACGCCGGA ATCCGTGATG GTCGACCGCC CGATCCAGAT CGGCGACTGG
CAGCCCGAGA ACGACGACGG CCGCTACCGG GGGGCCGTGC CCCTGCGGAC CGCCTTCGCG
CTCTCGATCA ACACCGTGGC GGCCCAGCTC GGGCAGGATG TCGGCATCCC GGCGGTGATC
GCCACCGCCC GCAAGCTCGG GATCCAGTCC GACCTGCCCA ACGTGCCGAG CCTCGTCCTC
GGCTCGGGCG CCGTGAGCCT CCTGGAGATG ACCCGCGCCT ACGGCTCGGT CCTGTCCGGG
CGCACCCCGC TCCAGACCTA CGGCATCCAG GCGATCCGCG GGGCCGCGCC GCAGCCGCTC
TACGTCCGCA CCGACGCGGC CCCGGGGCCG ATGCTGGCGC AGGAACCGCG CACGATGATG
CTCGACTCGC TGCAGGCGGT GGTGGAATCC GGCACCGGCC GCGCAGCGCG GGTGCCGGGC
CAGATCATCG GCGGCAAGAC CGGCACGAGC CAGGATTTCC GCGACGCGTG GTTCGTCGGC
ATGACCCCCG ACCTCGTGGT CGGGATCTGG GTCGGCAACG ACGACGACAG TCCGATGAAC
CGCATGTTCG GCGGTGAGAT GCCGGCCGGG ATCTTCCACG ACTTCGTCCA GCGGGCCACC
GAGAAGCTCG CGAAGGGCAG GGCCCGCCCC TCGGCGGAGC GGGCCGAGCC GGCCCGGGCG
ACGGCACCCG CACCCGAGCC GGCCGCGGTT GGCGAGGTCC GCGGCGTGCC GGAGGTGATC
GACACCGGCA CCCTCAACCT GCGCGGGCGA GTCGTGCGCC TCCTCGGCGT GGTCGGCGAG
CGCGGCCACC TCGCCCGCCA GCTCGCCAGC TACCTGCGCC GTCGCGAGGT CGTCTGCAGC
GGCCTGTCCG ACGGGGCCAC GGCCCGCTGC CGCATCGAGG GCGACGACCT CGCCGGGCTG
ATCCTGGCGG CGGGCGGCGC CCGCGCCTCG GAGGACGCCC CACCGGACCT CCTGGGCGCG
GAGGAGCAGG CCCGGGCCGA GCGGGTCGGC CTGTGGGGCC GGTGA
|
|---|
| Protein sequence | MTPDAPERAP ADGPKPPKPD PAADAPDPRL AAREAGRAAR DLARHLRTLL AAAGLGLART
GRALSARAAE RAARARADLP PAAETGARVR TRRFRPILGR RHPAVIAAAL VVLLPALALA
IYLFAAFVSL PPLGGAVVET GQRAITVEAD DGRVFATRGS FRGQKLTAAD LPPHLAQAIV
AIEDRRFYSH WGIDLRGLAR ATWRNLRGGG VREGGSTITQ QYVRLTSLNQ EKTLWRKVQE
AFLALRVEST MSKDAILLGY LDSAYFGAGA YGADAAARRY FGKPAKALNL PESAMLAGLV
RAPSQLAPTR NLGGAKERAD VVLQAMVETG AITQGEADAA RKQSVTLKSP PEAPPGTNYF
LDMIAGDVKR LAGTDGDMTV RSTLNLDLQS LAEGVVARRL DKDGARRKVG QAAMVVLSKE
GAILAMVGGR DYEDSQFNRA VQAKRQPGSL FKLLAYLTAY EKGYTPESVM VDRPIQIGDW
QPENDDGRYR GAVPLRTAFA LSINTVAAQL GQDVGIPAVI ATARKLGIQS DLPNVPSLVL
GSGAVSLLEM TRAYGSVLSG RTPLQTYGIQ AIRGAAPQPL YVRTDAAPGP MLAQEPRTMM
LDSLQAVVES GTGRAARVPG QIIGGKTGTS QDFRDAWFVG MTPDLVVGIW VGNDDDSPMN
RMFGGEMPAG IFHDFVQRAT EKLAKGRARP SAERAEPARA TAPAPEPAAV GEVRGVPEVI
DTGTLNLRGR VVRLLGVVGE RGHLARQLAS YLRRREVVCS GLSDGATARC RIEGDDLAGL
ILAAGGARAS EDAPPDLLGA EEQARAERVG LWGR
|
|---|
| |