Gene Mrad2831_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3520 
Symbol 
ID6139573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp3734626 
End bp3736053 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content73% 
IMG OID641629232 
Productmajor facilitator transporter 
Protein accessionYP_001756180 
Protein GI170749920 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.331795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGG TCCCGCACGG TCCGACAGGC GGCGCGCCGG GCAGCCCCCA GCCGCCCCCG 
CAGGCGCCCG TCCAGGACGG CCTGCCGCCC CGCGAGCGCG TCCTCGCCAT GGCGGCGATC
GGGCTTGCCA TGACCATGGC GGTCCTCGAC GGGGCCATCG TCAACGTGGC GCTGCCCGTC
ATGGCGAAGG ACCTCTCGGT CAGGCCGGCC GACGCGATCT TCGTGGTCAA CGCCTATCAG
GTCGCCGTCA CGGCGAGCCT CCTGCCCTTC GCGGCCCTCG GCGACATCTT CGGCTTCCGG
AAGGTCTACC TGCCGGGGCT CGCGGTGTTC GTCGCCGCCT CCCTCGCCTG CGCGGTCGCG
CCGAACCTGC CGCTCCTGAT CGCGGCCCGC ATCGTCCAGG GTCTCGGGGG CGCGGCGATC
ATGAGCGTCA ACATCGGCTT CGTGCGCTTC ATCTACCCGC ACCGGATGAT CGGCCAGGGG
GTCGCCAACG TCGCGCTCGT GGTGGCGGTC GCCTCGGCCG CCGGCCCGAC CGTGGCCGCG
GCGATCCTGT CGGTGGCGAC CTGGCCCTGG CTGTTCCTCG TGAACATCCC CGTGGGCCTC
CTGGCCCTGA CGGTGGCGTC CCGGACCCTG CCGGTCACAC CGGCGAGCGG CCGGCCGTTC
GATCTCGTGA GTGCGGTGCT CAACGCCCTG ACCTTCGGCC TGCTGATCAT CGGGATCGAC
GGCCTCGGCG ATCCGGAAGC CCGGGGCGTC GCCATCGTCG AACTCGCGGC CGCCCTGGTG
GTCGGCGCGG TGTTCGTCCG GCGTCAGATC CGGCTGCCCG CACCGCTCCT GCCGGTCGAC
CTGCTGCGGA TCCCCGCCTT CGCCCTGTCG ATGGCGACGT CGGTCGCCTC GTTCTGCGCC
CAGATGGTCT CCTACGTGGC GCTGCCCTTC TACTTCCAGG ACGTGCTGCA CCTCTCCAGC
ACCCAGACGG GCTTCCTGCT CACCCCCTGG CCGATCGCGG TCGCCGCGAT GGCGCCGATC
TCCGGCCGCC TCGCGGACCG CTACCCGCCC GGCATCCTCG GCGGCATCGG ACTGGCCATG
ATGGCCGCCG GGCTCGTCAG CGTGACCCTC CTGCCCGCGG TGCCCGCCAT CCTCGACATC
GTCTGGCGGC TGACCCTGTG CGGCCTCGGC TTCGGCCTGT TCCAGTCGCC CAACAATAAG
GTCATCGTCA CCTCGGCACC GCGCGAGCGG GCCGGCGGGG CGAGCGGGAT GCAGTCGACG
GCGCGGCTCA CCGGGCAGTC GCTCGGCGCG GCCCTGGTGG CGGTGATCTT CGGCCTGACC
CACGGGCTCG GGGCCGAGCG GGCCGTGACC ATCTCGCTGT CCTGCGCGGT GGCGCTCTCG
GTGATCGGCG GCTGCGCCAG CGTCCTGCGG CGGAGTCGGA GCGGCTAG
 
Protein sequence
MAQVPHGPTG GAPGSPQPPP QAPVQDGLPP RERVLAMAAI GLAMTMAVLD GAIVNVALPV 
MAKDLSVRPA DAIFVVNAYQ VAVTASLLPF AALGDIFGFR KVYLPGLAVF VAASLACAVA
PNLPLLIAAR IVQGLGGAAI MSVNIGFVRF IYPHRMIGQG VANVALVVAV ASAAGPTVAA
AILSVATWPW LFLVNIPVGL LALTVASRTL PVTPASGRPF DLVSAVLNAL TFGLLIIGID
GLGDPEARGV AIVELAAALV VGAVFVRRQI RLPAPLLPVD LLRIPAFALS MATSVASFCA
QMVSYVALPF YFQDVLHLSS TQTGFLLTPW PIAVAAMAPI SGRLADRYPP GILGGIGLAM
MAAGLVSVTL LPAVPAILDI VWRLTLCGLG FGLFQSPNNK VIVTSAPRER AGGASGMQST
ARLTGQSLGA ALVAVIFGLT HGLGAERAVT ISLSCAVALS VIGGCASVLR RSRSG